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ERMGT100_2_curated_scaffold_9

Search features with annotation key words

Displaying items 31-60 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_9_31
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(36896..37696)
-----------------
DNA (801bp)
protein (267aa)
id=5223477 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_32
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(37693..39084)
-----------------
DNA (1392bp)
protein (464aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEY8_SYNFM id=5223481 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RNA methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_33
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

39208..40221
-----------------
DNA (1014bp)
protein (338aa)
Pdz/Dhr/GlgF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX6_KORVE id=5223482 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative Serine protease do-like precursor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_34
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

40350..40973
-----------------
DNA (624bp)
protein (208aa)
NUDIX hydrolase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBD0_DESAA id=5223483 bin=16ft_combo_ws3_JS1 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NUDIX hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_35
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(40975..42327)
-----------------
DNA (1353bp)
protein (451aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U5_GEMAT id=5223486 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GAF domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_36
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

42546..43751
-----------------
DNA (1206bp)
protein (402aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] id=24583138 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
L-aspartate aminotransferase (EC:2.6.1.1)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_37
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

43755..44141
-----------------
DNA (387bp)
protein (129aa)
id=5223488 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_38
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(44148..45914)
-----------------
DNA (1767bp)
protein (589aa)
Lon protease n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA04_THEID id=5223489 bin=16ft_combo_ws3_JS1 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATP-dependent protease La
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_39
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(46222..46851)
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=2 Tax=Thermus RepID=E8PM23_THESS id=5224925 bin=16ft_combo_ws3_JS1 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
permease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_40
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(47004..47969)
-----------------
DNA (966bp)
protein (322aa)
peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287BEBC id=5224926 bin=16ft_combo_ws3_JS1 species=Psychrobacter sp. PAMC 21119 genus=Psychrobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
D-alanyl-D-alanine carboxypeptidase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_41
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(48082..48483)
-----------------
DNA (402bp)
protein (134aa)
Large conductance mechanosensitive channel protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025U4_SOLUE id=5224969 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
large conductance mechanosensitive channel protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_42
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(48579..50330)
-----------------
DNA (1752bp)
protein (584aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZ55_CORCM id=5224933 bin=16ft_combo_ws3_JS1 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_43
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(50327..51055)
-----------------
DNA (729bp)
protein (243aa)
UPI00029AF947 related cluster n=1 Tax=unknown RepID=UPI00029AF947 id=5224934 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
bacillithiol biosynthesis deacetylase BshB1
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_44
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

51197..51694
-----------------
DNA (498bp)
protein (166aa)
AIG2 family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDV9_MESOW id=5224935 bin=16ft_combo_ws3_JS1 species=Mesorhizobium opportunistum genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
AIG2 family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_45
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(51634..53262)
-----------------
DNA (1629bp)
protein (543aa)
Phosphorylase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CL74_SYNLT id=5224936 bin=16ft_combo_ws3_JS1 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alpha-glucan phosphorylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_46
unknown

Not on your lists

comp(53378..53893)
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_47
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(54110..55450)
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized conserved protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SJ73_HAHCH id=5224937 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_48
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(55566..56015)
-----------------
DNA (450bp)
protein (150aa)
bamK; GCN5-related N-acetyltransferase BamK id=24577278 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
bamK; GCN5-related N-acetyltransferase BamK
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_49
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

56099..56821
-----------------
DNA (723bp)
protein (241aa)
GGDEF domain protein n=6 Tax=Burkholderia thailandensis RepID=Q2T898_BURTA id=5224939 bin=16ft_combo_ws3_JS1 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative signaling protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_50
unknown

Not on your lists

comp(56938..57417)
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_51
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(57621..59021)
-----------------
DNA (1401bp)
protein (467aa)
Peptidase S15 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA71_SPHTD id=5223706 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase S15
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_52
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(59018..59908)
-----------------
DNA (891bp)
protein (297aa)
class IV aminotransferase (EC:4.1.3.38)
Aminotransferase, class IV n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY00_RUBXD id=5223707 bin=16ft_combo_ws3_JS1 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_53
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(59905..61317)
-----------------
DNA (1413bp)
protein (471aa)
pabB; para-aminobenzoate synthase component 1 (EC:2.6.1.85)
Para-aminobenzoate synthase component 1 n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LW69_THEPS id=5223708 bin=16ft_combo_ws3_JS1 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_54
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

61441..62778
-----------------
DNA (1338bp)
protein (446aa)
N-ethylammeline chlorohydrolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHR8_MYXSD id=5223709 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
amidohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_55
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

62775..63989
-----------------
DNA (1215bp)
protein (405aa)
Chlorohydrolase family protein n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGY3_CLOAI id=5223711 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
selenium metabolism protein SsnA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_56
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

64009..65658
-----------------
DNA (1650bp)
protein (550aa)
hypothetical protein id=24486229 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Amycolatopsis mediterranei genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_57
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65636..67165)
-----------------
DNA (1530bp)
protein (510aa)
Sulfatase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ51_9GAMM
Sulfatase {ECO:0000313|EMBL:EED30570.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
arylsulfatase
ERMGT100_2_curated_scaffold_9_58
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

67482..67793
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein id=24603408 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_59
RLO_PLX_64_10, Bacteria

Not on your lists

comp(67946..69259)
-----------------
DNA (1314bp)
protein (438aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036D8AB3
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ERMGT100_2_curated_scaffold_9_60
RLO_PLX_64_10, Bacteria

Not on your lists

comp(69256..70614)
-----------------
DNA (1359bp)
protein (453aa)
Fis family two component sigma-54 specific transcriptional regulator id=12554227 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chemotaxis protein CheY
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying items 31-60 of 221 in total

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