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SCN18_25_8_15_R4_B_scaffold_117

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Displaying items 91-120 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_117_89
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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88358..88594
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030FF8EC
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
rpmB; 50S ribosomal protein L28
SCN18_25_8_15_R4_B_scaffold_117_90
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


88609..88773
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003083940
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
rpmG; 50S ribosomal protein L33
SCN18_25_8_15_R4_B_scaffold_117_91
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88891..89652
DNA (762bp) protein (254aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E7659C
ubiquinone/menaquinone biosynthesis methyltransferase
SCN18_25_8_15_R4_B_scaffold_117_92
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89656..89847
DNA (192bp) protein (64aa)
SCN18_25_8_15_R4_B_scaffold_117_93
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89853..90566
DNA (714bp) protein (238aa)
Uracil-DNA glycosylase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWQ0_PSEUU
uracil-DNA glycosylase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_117_94
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90717..91583
DNA (867bp) protein (289aa)
RNA polymerase sigma factor RpoH n=2 Tax=Stenotrophomonas maltophilia RepID=B4SL96_STRM5
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RNA polymerase factor sigma-32
SCN18_25_8_15_R4_B_scaffold_117_95
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91653..92642)
DNA (990bp) protein (330aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
tal1; Transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MNE8_PSEPS
SCN18_25_8_15_R4_B_scaffold_117_96
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92657..94843)
DNA (2187bp) protein (729aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Primosomal protein N' n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWP1_PSEUU
primosomal protein N'
SCN18_25_8_15_R4_B_scaffold_117_97
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95319..96647
DNA (1329bp) protein (443aa)
Putative peptidase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UG38_XANAP
peptidase
Putative peptidase protein {ECO:0000313|EMBL:CBA17349.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
SCN18_25_8_15_R4_B_scaffold_117_98
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96822..99335
DNA (2514bp) protein (838aa)
outer membrane protein XadA n=1 Tax=Xanthomonas sacchari RepID=UPI000262A38D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46571.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_25_8_15_R4_B_scaffold_117_99
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99411..99608)
DNA (198bp) protein (66aa)
SCN18_25_8_15_R4_B_scaffold_117_100
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99671..101056
DNA (1386bp) protein (462aa)
multidrug transporter MatE n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB13C0
Multidrug transporter MatE {ECO:0000313|EMBL:KGQ18047.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Na+-driven multidrug efflux pump
SCN18_25_8_15_R4_B_scaffold_117_101
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101130..103031
DNA (1902bp) protein (634aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
sppA; protease IV (EC:3.4.21.-)
endopeptidase IV n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF8679
SCN18_25_8_15_R4_B_scaffold_117_102
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103059..103298)
DNA (240bp) protein (80aa)
SCN18_25_8_15_R4_B_scaffold_117_103
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103359..104138
DNA (780bp) protein (260aa)
Tropinone reductase n=3 Tax=Xanthomonas fuscans RepID=D4STC8_9XANT
Tropinone reductase {ECO:0000313|EMBL:KIJ71374.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
putative 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent
SCN18_25_8_15_R4_B_scaffold_117_104
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104280..104789)
DNA (510bp) protein (170aa)
SCN18_25_8_15_R4_B_scaffold_117_105
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104856..106799)
DNA (1944bp) protein (648aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Acetyl-coenzyme A synthetase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPC8_PSEUU
acetate/CoA ligase
SCN18_25_8_15_R4_B_scaffold_117_106
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106998..109124
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003159001
Peptidase M13 {ECO:0000313|EMBL:GAN45175.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase M13
SCN18_25_8_15_R4_B_scaffold_117_107
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109290..109502)
DNA (213bp) protein (71aa)
Putative cold shock protein n=1 Tax=Pseudomonas putida NBRC 14164 RepID=T2H633_PSEPU
cold-shock protein
Cold shock protein {ECO:0000313|EMBL:EFH99845.1}; TaxID=693985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savastanoi pv. savastanoi NCPPB 3335.;"
SCN18_25_8_15_R4_B_scaffold_117_108
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109750..110085)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX16_PSEUU
EF hand domain-containing protein {ECO:0000313|EMBL:AKC88300.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_109
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110082..111284)
DNA (1203bp) protein (401aa)
aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030BED7F
Fatty acid desaturase {ECO:0000313|EMBL:KGQ19127.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
aminotransferase
SCN18_25_8_15_R4_B_scaffold_117_110
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111373..112185
DNA (813bp) protein (271aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=2 Tax=Stenotrophomonas maltophilia RepID=I0KHV7_STEMA
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R4_B_scaffold_117_111
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112292..112873
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM54267.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Putative uncharacterized protein id=2495000 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_112
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112901..115702
DNA (2802bp) protein (934aa)
TPR repeat-containing serine/threonine protein kinase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTM6_PSEUP
Protein kinase {ECO:0000313|EMBL:EYR67998.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
TPR repeat-containing serine/threonine protein kinase
SCN18_25_8_15_R4_B_scaffold_117_113
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115705..116325)
DNA (621bp) protein (207aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TVB1_STEMA
SCN18_25_8_15_R4_B_scaffold_117_114
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116356..118398
DNA (2043bp) protein (681aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
ATP-dependent DNA helicase Rep n=1 Tax=Xanthomonas sacchari RepID=UPI000262A7BA
ATP-dependent DNA helicase Rep
SCN18_25_8_15_R4_B_scaffold_117_115
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118458..119369
DNA (912bp) protein (304aa)
acid phosphatase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037B0CAC
Acid phosphatase {ECO:0000313|EMBL:EYR68874.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
acid phosphatase
SCN18_25_8_15_R4_B_scaffold_117_116
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119473..120750)
DNA (1278bp) protein (426aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGM51237.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGM51237.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP60_PSEUU
SCN18_25_8_15_R4_B_scaffold_117_117
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120827..121699
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUZ1_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER55070.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_117_118
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121728..122294)
DNA (567bp) protein (189aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Hypothetical superoxide dismutase n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4LX06_9XANT
hypothetical superoxide dismutase
Displaying items 91-120 of 187 in total

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