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ACD45_276_5

Organism: ACD45

partial RP 41 / 55 MC: 11 BSCG 39 / 51 MC: 10 ASCG 0 / 38
Location: 2428..3432

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha n=21 Tax=Pseudomonadaceae RepID=RPOA_PSE14 (db=UNIREF evalue=3.0e-126 bit_score=455.0 identity=69.44 coverage=95.2238805970149) similarity UNIREF
DB: UNIREF
  • Identity: 69.44
  • Coverage: 95.22
  • Bit_score: 455
  • Evalue 3.00e-126
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 336.0
  • Bit_score: 444
  • Evalue 2.40e-122
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=23 to=317 evalue=2.7e-140 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.70e-140

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Taxonomy

R_Gammaproteobacteria_42_10 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCAGAATAATCCATTTGAATTTTTAACACCTCGCGAAATTGTCGTTGATGTTATTTCGCCCTATCACGCAAAGATCACATTAGAACCGTTAGAACGTGGTTTTGGACATGCTCTCGGGCCTGTATTGCGTAGGATTTTACTATCTTCTATGCCTGGTGCTGCTGTTGTCGAAGCGCAAATTGACGGTGTCTTGCATGAGTACAGCACGATTGCAGGTGTTAAAGAAGATGTAATCGAAATCATGCTTAATTTGAAGGGTGTCGCTATCAGGCTGCCGCATCACGAAGAAGTAACCTTGAAGATCAGCAAAAAAGGTCCTGGCGTCATTACAGCGGGCGATATCGAAAAAGAGTACGATATTGAAATTATTAATCCTAATCATGTCATTGCGCACTTAAATGAACATGGTGTACTCAATATGGTTTTGAAGGTGAGTTTGGGTAGAGGCTATGAACCCGCTCAAGCACGTGTTAAAAAATCAGAATCAAAAGTTGCGGTTGGCGTATTGCAACTTGATGCCAGTTTTAGTCCAGTACGCAGAGTGTCTTATGCAGTTGAAAATGCTCGTGTTGAACAACGTGCTGACTTAGATAAGCTGATCATTGATCTTGAAACAAATGGTACGCTTAATCCAGAAGAAGCGATTAGACGTTCTGCGACCATTCTACAACAACAGTTGGCTGCCTTTGTTGATTTACAGTCTCCCTTGCTAAAGCAAGAAAAATCATCTCATGAAGAAACGACAAACCCGTTTTATCAGCGCCCTGTCGATGATCTCGAGCTGACTGTCAGATCAGCAAATTGCTTAAAAGCAGAAAATATTTTTTACATCGGGGATTTAGTGCAGCGTACAGAAGCAGATCTTTTAAAGACCCCAAATCTAGGCAAGAAATCATTAACTGAAATTAAAAACGTACTCGCTACACATAATTTGTCATTAGGTATGAAAATTGACAGTTGGCGTGGTCCTGTGCGCGAGGAGAGTGAAGATGCGTCACGGTAA
PROTEIN sequence
Length: 335
MQNNPFEFLTPREIVVDVISPYHAKITLEPLERGFGHALGPVLRRILLSSMPGAAVVEAQIDGVLHEYSTIAGVKEDVIEIMLNLKGVAIRLPHHEEVTLKISKKGPGVITAGDIEKEYDIEIINPNHVIAHLNEHGVLNMVLKVSLGRGYEPAQARVKKSESKVAVGVLQLDASFSPVRRVSYAVENARVEQRADLDKLIIDLETNGTLNPEEAIRRSATILQQQLAAFVDLQSPLLKQEKSSHEETTNPFYQRPVDDLELTVRSANCLKAENIFYIGDLVQRTEADLLKTPNLGKKSLTEIKNVLATHNLSLGMKIDSWRGPVREESEDASR*