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ACD45_276_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit alpha n=21 Tax=Pseudomonadaceae RepID=RPOA_PSE14 (db=UNIREF evalue=3.0e-126 bit_score=455.0 identity=69.44 coverage=95.2238805970149) similarity UNIREF
DB: UNIREF 		69.44 95.22 455 3.00e-126 pre:PCA10_06160
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		68.2 336.0 444 2.40e-122 pre:PCA10_06160
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=23 to=317 evalue=2.7e-140 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 2.70e-140 pre:PCA10_06160
no description (db=HMMSmart db_id=SM00662 from=23 to=233 evalue=3.4e-85 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 3.40e-85 pre:PCA10_06160
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=53 to=177 evalue=2.6e-44 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 2.66e-44 pre:PCA10_06160
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=53 to=176 evalue=3.0e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 3.00e-41 pre:PCA10_06160
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=4 to=234 evalue=1.8e-29 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 1.80e-29 pre:PCA10_06160
RPOA_METCA_Q605D7; (db=BlastProDom db_id=PD001179 from=256 to=321 evalue=1.0e-27 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: BlastProDom 		null null null 1.00e-27 pre:PCA10_06160
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=246 to=308 evalue=6.4e-26 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 6.40e-26 pre:PCA10_06160
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=249 to=329 evalue=3.2e-25 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 3.20e-25 pre:PCA10_06160
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=246 to=329 evalue=1.6e-24) iprscan interpro
DB: Gene3D 		null null null 1.60e-24 pre:PCA10_06160
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=64 to=155 evalue=2.4e-22 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 2.40e-22 pre:PCA10_06160
RNA_pol_L (db=HMMPfam db_id=PF01193 from=28 to=231 evalue=3.3e-19 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 3.30e-19 pre:PCA10_06160
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=5 to=317 evalue=33.817 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.38e+01 pre:PCA10_06160
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated UNIPROT
DB: UniProtKB 		100.0 334.0 651 6.40e-184 ggdbv1_88003309