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GD18-4_B1_scaffold_346740

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_346740_1
unknown

Not on your lists

comp(1..177)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_2
unknown

Not on your lists

comp(255..1385)
-----------------
DNA (1131bp)
protein (377aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_3
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(2121..3266)
-----------------
DNA (1146bp)
protein (382aa)
UPI00020A986A related cluster id=2101108 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Radical SAM domain protein
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
GD18-4_B1_scaffold_346740_4
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3441..3959
-----------------
DNA (519bp)
protein (173aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
Carboxymuconolactone decarboxylase domain protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RGM1_9PLAN
hypothetical protein
GD18-4_B1_scaffold_346740_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3962..4477
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C6S3_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI66865.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
GD18-4_B1_scaffold_346740_6
unknown

Not on your lists

4591..5655
-----------------
DNA (1065bp)
protein (355aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5659..7065)
-----------------
DNA (1407bp)
protein (469aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3E2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EYF00224.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_346740_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..9097)
-----------------
DNA (2025bp)
protein (675aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCS7_SORC5
Serine/threonine kinase {ECO:0000313|EMBL:EYF01197.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_346740_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9181..10692
-----------------
DNA (1512bp)
protein (504aa)
mercuric reductase n=1 Tax=Salisaeta longa RepID=UPI0003B423A5
mercuric reductase
Mercuric reductase {ECO:0000313|EMBL:ABC45686.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
GD18-4_B1_scaffold_346740_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10731..11066
-----------------
DNA (336bp)
protein (112aa)
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7D5_DESTA
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AKF06957.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
4-carboxymuconolactone decarboxylase
GD18-4_B1_scaffold_346740_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11063..12103
-----------------
DNA (1041bp)
protein (347aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003464FE5
Radical SAM {ECO:0000313|EMBL:AKF06958.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_346740_12
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12100..12609
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ39_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY17076.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_346740_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12606..13310
-----------------
DNA (705bp)
protein (235aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium W4-39b RepID=H9BWR7_9BACT
glycosyl transferase family 2
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
GD18-4_B1_scaffold_346740_14
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13314..13514)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DYG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCU78163.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
peroxidase
GD18-4_B1_scaffold_346740_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13614..13859)
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized peroxidase-related enzyme subfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYX0_SALRD
peroxidase-related protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GD18-4_B1_scaffold_346740_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14119..14673
-----------------
DNA (555bp)
protein (185aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCP7_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96218.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_346740_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14677..15339
-----------------
DNA (663bp)
protein (221aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRL6_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN93641.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_346740_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15374..15697
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YXY7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
GD18-4_B1_scaffold_346740_19
unknown

Not on your lists

15772..15957
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_20
unknown

Not on your lists

comp(15966..16160)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_21
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16214..19024)
-----------------
DNA (2811bp)
protein (937aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JGN0_ANAD2
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_346740_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19534..20688)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y070_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36308.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_346740_23
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20801..22195)
-----------------
DNA (1395bp)
protein (465aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobalamin-binding-like domain n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74GJ9_GEOSL
Radical SAM protein {ECO:0000313|EMBL:AJY69979.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
GD18-4_B1_scaffold_346740_24
unknown

Not on your lists

22579..22818
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_25
unknown

Not on your lists

comp(22923..23297)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

GD18-4_B1_scaffold_346740_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23473..24150
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF11313.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_346740_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24430..26262)
-----------------
DNA (1833bp)
protein (611aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNJ2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34742.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_346740_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26352..27395
-----------------
DNA (1044bp)
protein (348aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWU4_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02821.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_346740_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27395..29587
-----------------
DNA (2193bp)
protein (731aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFW9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_346740_30
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29888..30994
-----------------
DNA (1107bp)
protein (369aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FN16_STIAD
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
Displaying items 1-30 of 62 in total

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