ggKbase home page

SCN18_25_8_15_R2_B_scaffold_525_21

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(23865..24632)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESD3_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 260.0
  • Bit_score: 139
  • Evalue 2.60e-30
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 260.0
  • Bit_score: 139
  • Evalue 7.40e-31
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACK49823.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 260.0
  • Bit_score: 139
  • Evalue 3.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGATCTCCGGTTCTCGGCCGATCGGCGACGATGACATCCAGGCTTTCATCGACGGACGGCTTGCGCCGGTCCGCCAGCGGGAGGTCGAGGCCTTCCTCGCATCGGAGCCCGCCCTGCGCATCCGCGCCGAGCAGTTCCGGGCGGACGCGCAGGCGCTGCGGGCGGCCGCTCAGCTTTGCCGTCCCGCGCCGATCCCCGCCTCCTTGCGACTGAGCGAGGTAAGGCGCCGAAACGCGGCGCGGACCATGGCGGTCCACCGGCGTCTGGCGGCCGGCATCTGCATCTTCGCTCTTGGCACCGCGCTTGGAATGGCCATTCCTCGGCAGGCGGCCGAAACGCCGCCGCCACGGCCGCAAATGACCGATGCGGTGATCGCCTTCCGCGCCTTCGCCGGGCGTGCGGGCGACGCAGTCGAGGTCCCGGCGGCCCAGACCGCCGCGCTGAAGCGGATGATGTCCCGGCACCTGAAGCAGAATGTCTCGGTTCCCGATCTCTCCGGACTCGGACTGGCTTTTCGGGGAGGCAGGCTGCTGTCGAGCGACGAGGGCCCTGGCGGCATGTTCGTCTATGACGATCCGGCCGGCGGCCATGTGGCGCTTTACATGAAAACCCTCGCCAGCCCGCGCAAGGCAGCGCTCGCATCGCGGCAGGAGGGGGACCTGGTGGCGTATTTCTGGTTCACCGGCGAGCTCGGCTATGCGGTGCTCGGCTCGTCAGGCTCGCCCTTCGTCACGCGGGCCGCCGAACGGCTGAGCGATGTCCCGTGA
PROTEIN sequence
Length: 256
MISGSRPIGDDDIQAFIDGRLAPVRQREVEAFLASEPALRIRAEQFRADAQALRAAAQLCRPAPIPASLRLSEVRRRNAARTMAVHRRLAAGICIFALGTALGMAIPRQAAETPPPRPQMTDAVIAFRAFAGRAGDAVEVPAAQTAALKRMMSRHLKQNVSVPDLSGLGLAFRGGRLLSSDEGPGGMFVYDDPAGGHVALYMKTLASPRKAALASRQEGDLVAYFWFTGELGYAVLGSSGSPFVTRAAERLSDVP*