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SCN18_25_1_16_R2_B_scaffold_100

Search features with annotation key words

Displaying items 211-236 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_100_211
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204694..206178)
DNA (1485bp) protein (495aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:ABE61983.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABE61983.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glutamate synthase (NADH) small subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP64_NITHX
SCN18_25_1_16_R2_B_scaffold_100_212
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206292..211064)
DNA (4773bp) protein (1591aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:ABE61984.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABE61984.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glutamate synthase (NADH) large subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP63_NITHX
SCN18_25_1_16_R2_B_scaffold_100_213
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211586..212314
DNA (729bp) protein (243aa)
NitT/TauT family transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDD3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC58169.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_100_214
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212409..212876)
DNA (468bp) protein (156aa)
Heat shock protein Hsp20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP62_NITHX
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABE61985.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_100_215
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213072..214016
DNA (945bp) protein (315aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP61_NITHX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABE61986.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_100_216
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214031..214663
DNA (633bp) protein (211aa)
lysine transporter LysE n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA62EF
Bradyrhizobium elkanii strain UASWS1015 Contig166, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51252.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
efflux protein
SCN18_25_1_16_R2_B_scaffold_100_217
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(214671..215522)
DNA (852bp) protein (284aa)
Putative dienelactone hydrolase {ECO:0000313|EMBL:CCD95947.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CCD95947.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
Putative dienelactone hydrolase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SP20_9BRAD
dienelactone hydrolase
SCN18_25_1_16_R2_B_scaffold_100_218
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215558..216310)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37079.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_100_219
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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216449..217342
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QHX2_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EIG59378.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
LysR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_100_220
unknown

Not on your lists

comp(217373..217555)
DNA (183bp) protein (61aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_100_221
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217648..218433)
DNA (786bp) protein (262aa)
histidinol-phosphate phosphatase (EC:3.1.3.25)
Histidinol-phosphate phosphatase, putative, inositol monophosphatase {ECO:0000313|EMBL:ABE61987.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABE61987.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Histidinol-phosphate phosphatase, putative, inositol monophosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP60_NITHX
SCN18_25_1_16_R2_B_scaffold_100_222
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218928..219815)
DNA (888bp) protein (296aa)
N-formylglutamate amidohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP59_NITHX
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ABE61988.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_100_223
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219990..220361
DNA (372bp) protein (124aa)
Response regulator receiver n=3 Tax=Nitrobacter RepID=Q3SNE5_NITWN
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ABA06196.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_25_1_16_R2_B_scaffold_100_trna_1
unknown

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220435..220506
DNA (72bp)
transferRNA Val
SCN18_25_1_16_R2_B_scaffold_100_224
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220755..221309)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003607F09
Uncharacterized protein {ECO:0000313|EMBL:KJC40419.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative MarR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_100_225
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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221535..222743
DNA (1209bp) protein (403aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003734581
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13694.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R2_B_scaffold_100_226
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222790..224139
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BE6DB
Uncharacterized protein {ECO:0000313|EMBL:KJC40423.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
SCN18_25_1_16_R2_B_scaffold_100_227
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224132..224650
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371177E
Uncharacterized protein {ECO:0000313|EMBL:KJC40422.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
aromatic-ring-hydroxylating dioxygenase subunit beta
SCN18_25_1_16_R2_B_scaffold_100_228
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224661..224993
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NNM0_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44204.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Rieske (2Fe-2S) iron-sulfur domain
SCN18_25_1_16_R2_B_scaffold_100_229
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225152..225493
DNA (342bp) protein (114aa)
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N5I8_RHOPA
5-carboxymethyl-2-hydroxymuconate delta-isomerase
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase {ECO:0000313|EMBL:CAE28427.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_25_1_16_R2_B_scaffold_100_230
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225556..226350)
DNA (795bp) protein (265aa)
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4U3_9BRAD
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
IclR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_100_231
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226388..227641)
DNA (1254bp) protein (418aa)
ferredoxin reductase n=1 Tax=Afipia birgiae RepID=UPI0002E8185D
Uncharacterized protein {ECO:0000313|EMBL:EKS36515.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ferredoxin reductase
SCN18_25_1_16_R2_B_scaffold_100_232
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227943..229301
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDT0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36513.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phthalate 4,5-dioxygenase
SCN18_25_1_16_R2_B_scaffold_100_233
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229303..230778
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D688_BRAJP
glutamine synthetase
Uncharacterized protein {ECO:0000313|EMBL:BAL07356.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R2_B_scaffold_100_234
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230844..232274)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF5_RHOP2
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABD07805.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_25_1_16_R2_B_scaffold_100_235
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232330..232902)
DNA (573bp) protein (191aa)
Esterase/lipase/thioesterase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF6_RHOP2
esterase/lipase/thioesterase
Esterase/lipase/thioesterase {ECO:0000313|EMBL:ABD07804.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying items 211-236 of 236 in total

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