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SCN18_25_1_16_R2_B_scaffold_100_230

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(225556..226350)

Top 3 Functional Annotations

Value Algorithm Source
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 265.0
  • Bit_score: 409
  • Evalue 1.40e-111
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 265.0
  • Bit_score: 409
  • Evalue 2.00e-111
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 264.0
  • Bit_score: 379
  • Evalue 4.40e-103

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCCGAAACTGAAGCGCACAGAGGAAGAGAAGAACGCGCGTGGCGGCGCGGAATTCATCGAAAGCCTCGATCGCGGTCTTCGGGTGCTTCAATCGTTCGGCATCGATCGCCGTCCGATGACGCTGAGCGACATCGCCAGGATAGCGAACCTGCCGCGCGCCACCGTTCGCCGCATCCTGATGACGCTGCAGCGGTCCGGCTTCGTTGCAGGAGACGAGCGGCTGTTTTCCCTGACGCCGCGCGTACTGCTGCTAGCCTCCGCTTATCTGACTTCAAACCAGATCAGCACCGTGCTGCAGCCGTTGATGGACGAGGTCTCGGTGAAGGCCAGGGAAGTCTGTTCCGTTGCGATCCTCGACGCGGTCGATGTGGTGTTCGTCGCCCGCTCCAGCCCCGCACGCATCTTTTCGATGGGGCTGGATATCGGCTATCGCTTGCCCGCGTTCTGCACCTCGGTCGGACGGGTGCTACTCAGCCGGCTTTCCAACGAGGAACTGACCGCAGCGATCAGCGATATGACTCTGACGGCGCAAACCCCGAGTACGCTGCTCGACAAGCCGACACTGATCGCCACCATCATCACCGACCGCACCAAGGGATACAGTCTGGTCGATCGGGAAGCCGAAGAGGGATTCCGCTCGATCTCGGTGCCGCTGCGCCGCTACGACGGAACGATTGTCGCAGCCGCGAATATCGGCGCACATGTCGACCGCATCACCACGGGCGAAATGATCGACCGCTTTCTGCCTCTCCTGAAGGATCTATCCGACGCGGCACAGCCGCTGCTGGTCTGA
PROTEIN sequence
Length: 265
MPKLKRTEEEKNARGGAEFIESLDRGLRVLQSFGIDRRPMTLSDIARIANLPRATVRRILMTLQRSGFVAGDERLFSLTPRVLLLASAYLTSNQISTVLQPLMDEVSVKAREVCSVAILDAVDVVFVARSSPARIFSMGLDIGYRLPAFCTSVGRVLLSRLSNEELTAAISDMTLTAQTPSTLLDKPTLIATIITDRTKGYSLVDREAEEGFRSISVPLRRYDGTIVAAANIGAHVDRITTGEMIDRFLPLLKDLSDAAQPLLV*