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400_zone1_2014_Ig3401_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_111_1
unknown

Not on your lists

3..98
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_2
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

Not on your lists

796..1122
-----------------
DNA (327bp)
protein (109aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AXA3_RHOOB
hypothetical protein Tax=RBG_13_ACD39_59_9_curated
hypothetical protein
400_zone1_2014_Ig3401_scaffold_111_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1119..1931
-----------------
DNA (813bp)
protein (271aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00035D43A1
Uncharacterized protein {ECO:0000313|EMBL:EOR27225.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
secA; protein translocase subunit SecA
400_zone1_2014_Ig3401_scaffold_111_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1928..2455
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N462_DESTT
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
400_zone1_2014_Ig3401_scaffold_111_5
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

2724..3125
-----------------
DNA (402bp)
protein (134aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7W4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ48383.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
400_zone1_2014_Ig3401_scaffold_111_6
unknown

Not on your lists

comp(4135..5115)
-----------------
DNA (981bp)
protein (327aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_7
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5509..5934)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036E90B5
hypothetical protein
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
400_zone1_2014_Ig3401_scaffold_111_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5931..6530)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ87_NITGG
putative nucleotidyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
400_zone1_2014_Ig3401_scaffold_111_9
unknown

Not on your lists

7093..7551
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_10

Not on your lists

comp(7773..8006)
-----------------
DNA (234bp)
protein (78aa)
Transcriptional regulator, AsnC family n=1 Tax=Pyrococcus sp. ST04 RepID=I3RGJ1_9EURY
Marine sediment metagenome DNA, contig: S06H3_C01070 {ECO:0000313|EMBL:GAH91586.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
AsnC family transcriptional regulator
400_zone1_2014_Ig3401_scaffold_111_11

Not on your lists

comp(8078..8275)
-----------------
DNA (198bp)
protein (66aa)
Marine sediment metagenome DNA, contig: S06H3_C01070 {ECO:0000313|EMBL:GAH91584.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
400_zone1_2014_Ig3401_scaffold_111_12

Not on your lists

comp(8340..9053)
-----------------
DNA (714bp)
protein (238aa)
Pheromone shutdown protein (TraB) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29916_ARCFU
Marine sediment metagenome DNA, contig: S06H3_C01070 {ECO:0000313|EMBL:GAH91582.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
pheromone shutdown-related protein TraB
400_zone1_2014_Ig3401_scaffold_111_13
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(9028..9663)
-----------------
DNA (636bp)
protein (212aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:ENN96342.1}; EC=1.1.1.193 {ECO:0000313|EMBL:ENN96342.1};; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcal
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase (EC:1.1.1.193)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYY7_9EURY
400_zone1_2014_Ig3401_scaffold_111_14
unknown

Not on your lists

comp(9853..10467)
-----------------
DNA (615bp)
protein (205aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_trna_2
unknown

Not on your lists

comp(10796..10880)
-----------------
DNA (85bp)
transferRNA
400_zone1_2014_Ig3401_scaffold_111_15

Not on your lists

comp(11189..11749)
-----------------
DNA (561bp)
protein (187aa)
Protein of DIM6/NTAB family n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U8V5_9EURY
Marine sediment metagenome DNA, contig: S06H3_C04347 {ECO:0000313|EMBL:GAI17431.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
flavin reductase domain-containing protein
400_zone1_2014_Ig3401_scaffold_111_16
unknown

Not on your lists

11928..12443
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_trna_1
unknown

Not on your lists

comp(12551..12641)
-----------------
DNA (91bp)
transferRNA
400_zone1_2014_Ig3401_scaffold_111_17

Not on your lists

13213..14352
-----------------
DNA (1140bp)
protein (380aa)
UPI0003D1A84E related cluster n=1 Tax=unknown RepID=UPI0003D1A84E
Marine sediment metagenome DNA, contig: S01H4_L05096 {ECO:0000313|EMBL:GAG77628.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
400_zone1_2014_Ig3401_scaffold_111_18
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(14410..15333)
-----------------
DNA (924bp)
protein (308aa)
L-alanine dehydrogenase (EC:1.4.1.1 4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=583356 species="Archaea; Crenarchaeota; Th
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI0003721557 rbh
400_zone1_2014_Ig3401_scaffold_111_19
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15639..16412)
-----------------
DNA (774bp)
protein (258aa)
Pantothenate synthetase {ECO:0000313|EMBL:ABN70470.1}; EC=6.3.2.1 {ECO:0000313|EMBL:ABN70470.1};; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Sta
Pantothenate synthetase n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DPB0_STAMF
hypothetical protein
400_zone1_2014_Ig3401_scaffold_111_20
unknown

Not on your lists

16447..17169
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_111_21
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

17182..18426
-----------------
DNA (1245bp)
protein (415aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GJQ7_METTF
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
400_zone1_2014_Ig3401_scaffold_111_22

Not on your lists

comp(18427..19239)
-----------------
DNA (813bp)
protein (271aa)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VPA5_9EURY
Marine sediment metagenome DNA, contig: S06H3_L04104 {ECO:0000313|EMBL:GAI04678.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NAD synthetase
400_zone1_2014_Ig3401_scaffold_111_23

Not on your lists

comp(19248..20069)
-----------------
DNA (822bp)
protein (274aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7Q1_METTP
Marine sediment metagenome DNA, contig: S06H3_L02859 {ECO:0000313|EMBL:GAI05644.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
400_zone1_2014_Ig3401_scaffold_111_24
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20066..20926)
-----------------
DNA (861bp)
protein (287aa)
Prephenate dehydrogenase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U024_9EURY
tyrA; prephenate dehydrogenase TyrA
Prephenate dehydrogenase {ECO:0000313|EMBL:EKQ53646.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobact
400_zone1_2014_Ig3401_scaffold_111_25
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(20923..21816)
-----------------
DNA (894bp)
protein (298aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=190192 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=AROE_METKA
AroE; shikimate 5-dehydrogenase
400_zone1_2014_Ig3401_scaffold_111_26
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21777..22517)
-----------------
DNA (741bp)
protein (247aa)
3-dehydroquinate dehydratase, type i (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWD9_METFV
400_zone1_2014_Ig3401_scaffold_111_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(22527..23630)
-----------------
DNA (1104bp)
protein (368aa)
3-dehydroquinate synthase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7N2_METSL
3-dehydroquinate synthase Tax=RBG_16_Euryarchaeota_41_19_curated
3-dehydroquinate synthase
400_zone1_2014_Ig3401_scaffold_111_28
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(23647..24447)
-----------------
DNA (801bp)
protein (267aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVI0_METKA rbh
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
Displaying items 1-30 of 62 in total

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