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cn_combo_scaffold_2760

Alias: PHAGE1_46a

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2760_1
unknown

Not on your lists

2..88
-----------------
DNA (87bp)
protein (29aa)

This feature has no annotations

cn_combo_scaffold_2760_2
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

941..2131
-----------------
DNA (1191bp)
protein (397aa)
cell division protein Fic n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035D287C
Uncharacterized protein {ECO:0000313|EMBL:CAD86417.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
hypothetical protein
cn_combo_scaffold_2760_3
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2188..2622)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=C3KFN3_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO64284.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (A
cn_combo_scaffold_2760_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2727..3344
-----------------
DNA (618bp)
protein (206aa)
Glutathione-S-transferase-like protein n=4 Tax=Bacteria RepID=Q6XUT8_PSEPU
gst; glutathione-S-transferase-like protein
Putative glutathione S-transferase {ECO:0000313|EMBL:ACQ63502.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
cn_combo_scaffold_2760_5

Not on your lists

3357..4421
-----------------
DNA (1065bp)
protein (355aa)
Putative oxidoreductase n=1 Tax=uncultured bacterium RepID=Q0KK69_9BACT
Putative oxidoreductase {ECO:0000313|EMBL:BAF30948.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
morB; morphinone reductase
cn_combo_scaffold_2760_6
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4421..5227
-----------------
DNA (807bp)
protein (269aa)
Aromatic ring-opening dioxygenase catalytic subunit LigB n=1 Tax=Citreicella sp. 357 RepID=I1AXL1_9RHOB
Aromatic ring-opening dioxygenase LigA {ECO:0000313|EMBL:KEJ93803.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="
catalytic LigB subunit of aromatic ring-opening dioxygenase
cn_combo_scaffold_2760_7
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5663..6028
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0003683C0E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47371.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
cn_combo_scaffold_2760_8
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6012..6563
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AYJ4_9RHOO
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP88788.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
cn_combo_scaffold_2760_9

Not on your lists

6647..7000
-----------------
DNA (354bp)
protein (118aa)
regulator n=1 Tax=Lamprocystis purpurea RepID=UPI000370B645
Regulator PrlF {ECO:0000313|EMBL:EQD74753.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sohA; regulators of stationary/sporulation gene expression
cn_combo_scaffold_2760_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6945..7619
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ATP6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ16209.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
cn_combo_scaffold_2760_11
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7616..7843
-----------------
DNA (228bp)
protein (76aa)
DNA-binding protein n=1 Tax=Methylococcus capsulatus RepID=UPI0003064DCC
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:EAR22902.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;"
DNA binding domain-containing protein
cn_combo_scaffold_2760_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7855..8322
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNV2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR22901.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
cn_combo_scaffold_2760_13
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8334..11180
-----------------
DNA (2847bp)
protein (949aa)
virulence associated protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002FF55CA
Uncharacterized protein {ECO:0000313|EMBL:EAR22900.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
ATPase
cn_combo_scaffold_2760_14
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11177..14026
-----------------
DNA (2850bp)
protein (950aa)
helicase n=1 Tax=Methylococcus capsulatus RepID=UPI000320078A
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EAR22893.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source
helicase
cn_combo_scaffold_2760_15
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14023..16017
-----------------
DNA (1995bp)
protein (665aa)
alkaline phosphatase n=1 Tax=Methylococcus capsulatus RepID=UPI000312AA50
Uncharacterized protein {ECO:0000313|EMBL:EAR22892.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
alkaline phosphatase
cn_combo_scaffold_2760_16
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16023..16745
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNU2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR22891.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
cn_combo_scaffold_2760_17
Acidithiobacillus phage AcaML1, Caudovirales, Viruses

Not on your lists

comp(16832..17302)
-----------------
DNA (471bp)
protein (157aa)
lysozyme (EC:3.2.1.17)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1229761 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Acidithiobacill
Lysozyme n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AE87_BURM1
cn_combo_scaffold_2760_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17299..17775)
-----------------
DNA (477bp)
protein (159aa)
membrane protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003820327
Uncharacterized protein {ECO:0000313|EMBL:EIK90328.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical membrane protein
cn_combo_scaffold_2760_19
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18090..18440)
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002DF1A65
Uncharacterized protein {ECO:0000313|EMBL:EWS54256.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
cn_combo_scaffold_2760_20
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18440..20641)
-----------------
DNA (2202bp)
protein (734aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00031F35D8
Uncharacterized protein {ECO:0000313|EMBL:EIZ04599.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
cn_combo_scaffold_2760_21
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20638..20910)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00031327BB
Uncharacterized protein {ECO:0000313|EMBL:EIZ04600.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
cn_combo_scaffold_2760_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20907..21146)
-----------------
DNA (240bp)
protein (80aa)
membrane protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002FE8EC9
Membrane protein {ECO:0000313|EMBL:KGG93053.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
hypothetical protein
cn_combo_scaffold_2760_23
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21156..21953)
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002FAC125
Uncharacterized protein {ECO:0000313|EMBL:EIZ04602.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
cn_combo_scaffold_2760_24
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21963..23654)
-----------------
DNA (1692bp)
protein (564aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00031B79DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC32311.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
cn_combo_scaffold_2760_25
Pseudomonas phage YuA, Yualikevirus, Caudovirales, Viruses

Not on your lists

comp(23662..24654)
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein, partial n=1 Tax=Methylococcus capsulatus RepID=UPI00036B94B2
Structural phage protein {ECO:0000313|EMBL:CAO77826.1}; TaxID=462590 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Pseudomonas phage YuA.;"
cn_combo_scaffold_2760_26
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..25593)
-----------------
DNA (933bp)
protein (311aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0003055BE3
hypothetical protein
Hypothetical phage-related protein {ECO:0000313|EMBL:CBA14770.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthom
cn_combo_scaffold_2760_27
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25594..28791)
-----------------
DNA (3198bp)
protein (1066aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0003743A17
Phage protein {ECO:0000313|EMBL:EIZ04606.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
phage protein
cn_combo_scaffold_2760_28
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28876..29523)
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002DF217E
Uncharacterized protein {ECO:0000313|EMBL:EIZ04607.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
cn_combo_scaffold_2760_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29713..30102)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00035E3B44
Uncharacterized protein {ECO:0000313|EMBL:KGG93046.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
cn_combo_scaffold_2760_30
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30257..31279)
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2A3G3_9PSED
Tyrosine recombinase XerD {ECO:0000313|EMBL:KFB73695.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;
putative integrase/recombinase
Displaying items 1-30 of 48 in total

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