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berkeley_reactor_200306_biofilm_scaffold_8117_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17026..17925)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HQZ6_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 294.0
  • Bit_score: 422
  • Evalue 2.40e-115
lysR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 294.0
  • Bit_score: 422
  • Evalue 6.70e-116
Tax=RBG_16_Alphaproteobacteria_64_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 292.0
  • Bit_score: 426
  • Evalue 3.00e-116

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Taxonomy

RBG_16_Alphaproteobacteria_64_48_curated → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGATCGACAAGCTGGAATTCCTGATCGCCCTGTCGCGCGAGCGCCATTTCGGCCGGGCGGCCGAGGTCTGCGGCGTCACCCAGCCGACCCTGTCCGCCGGCCTGAAGCAGCTCGAGGGCGAGCTCGGCGTCCTCCTGGTGGCGCGCGGCTCGCGCTTCCAGGGCTTCACGGCCGAGGGCGAGCGGGTGCTGGACTGGGCCCGCCGCATCGTCGGCGACGCCCGCGCCATGCGCCAGGAGGTCGACGCCCTGAAGCGAGGCCTCAACGGCCACCTCACCATCTCGGCGATCCCCACCGCCCTCTCCATGGTCGCGGCCTTGACCACGCCCTACCGCGCCCGCCATCCCAACGTCACCTTCACCATCCTGTCGCGCACCTCCGCCGAGGTGCTGCAGGAGCTGGAGGACCTCGCCATCGACGCCGGCATCAGCTATCTCGACAACGAGCCGCTCGGCCGCGTCGCCACGGTCGAGCTCTACCGCGAGAGCTATCGCCTGCTCACGGCCGCGGACGGCGAGTTCGGCAAGCGCGAGCGCATCACCTGGGCCGAGGCCGGGCGGGTGCCGCTCTGCCTGCTGACGCCCGACATGCAGAACCGGCGCATCATCGACCAGCTCCTGCGCGGCGCCGGGGCCGAGGTGGCGCCGACCCTGGTCTCCAACTCGCTGCAGGTCCTGCTCAGCCATGTCCGGACCGGCCGCTGGTCGAGCGTCATGCCCTCGATCCTGGTCGAGACGCTCGGCGTCGGCGAACGGGTGCGCTCGATTCCGATCGCCGAGCCCGAGGTGCACCACCTCGTCGGCCTGGTGGTGCCGCGCCGCGAGCCGCAGACCCCGCTGGTGGCGGCGCTGGTCGCCGAGGCCCGGCGCTTTGCCGCCAGGGGCATCGCCCCGGCCTGA
PROTEIN sequence
Length: 300
MIDKLEFLIALSRERHFGRAAEVCGVTQPTLSAGLKQLEGELGVLLVARGSRFQGFTAEGERVLDWARRIVGDARAMRQEVDALKRGLNGHLTISAIPTALSMVAALTTPYRARHPNVTFTILSRTSAEVLQELEDLAIDAGISYLDNEPLGRVATVELYRESYRLLTAADGEFGKRERITWAEAGRVPLCLLTPDMQNRRIIDQLLRGAGAEVAPTLVSNSLQVLLSHVRTGRWSSVMPSILVETLGVGERVRSIPIAEPEVHHLVGLVVPRREPQTPLVAALVAEARRFAARGIAPA*