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berkeley_reactor_200306_biofilm_scaffold_8117_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18379..18843)

Top 3 Functional Annotations

Value Algorithm Source
MgtC/SapB transporter n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HYX9_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 6.60e-29
MgtC/SapB transporter {ECO:0000313|EMBL:KFC67080.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 149.0
  • Bit_score: 149
  • Evalue 3.70e-33
MgtC/SapB transporter similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 1.90e-29

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGACCGACGCCCCTCTGGATCTCGTCGCCCGCCTGGTGGTGGGCATGCTGGCGGGCATGCTGATCGGCCTCAACCGCGTCCGCCACCGCCGGGGCGTGGGCATGCGCACCCTCGGCCTGGTCGGCCTCGGCTCGGCGGTCGCGGTGGCGATCTTCCAGGGCGCGGCCGATGCCAATGCGGCGAGCCGGGCCGTGCAGGGCATCCTGACCGGCGTCGGCTTCCTCGGCGCCGGCGTGATCCTGCACCGCACCAACGAGGACGTGCCGCGCGGCCTCACCACGGCGGCGGCGACCTGGGTGACGGCGATGCTCGGCGCGGCCGCCGGCGCCGGCGCCTGGCTGCTGGTCGGCACCGGCGTCGTCCTCGCGGTGGTGCTGCTGGCGGTCGGCGAGCGCGTCGAGCGGCTGTTCGGCGGCCGGGCCGACCGGGATGAAGCGGCTGCCTCGGGCCCGTCCCGCGACTGA
PROTEIN sequence
Length: 155
MTDAPLDLVARLVVGMLAGMLIGLNRVRHRRGVGMRTLGLVGLGSAVAVAIFQGAADANAASRAVQGILTGVGFLGAGVILHRTNEDVPRGLTTAAATWVTAMLGAAAGAGAWLLVGTGVVLAVVLLAVGERVERLFGGRADRDEAAASGPSRD*