ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_8117_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19001..22462

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=133552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocapsa.;" source="Methylocapsa acidiphila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 1149.0
  • Bit_score: 1816
  • Evalue 0.0
pyruvate carboxylase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7C4E similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 1149.0
  • Bit_score: 1877
  • Evalue 0.0
pyruvate carboxylase similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 1149.0
  • Bit_score: 1790
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocapsa acidiphila → Methylocapsa → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3462
ATGCGCCCACCCTTCCGCCGCCTGCTCGTCGCCAACCGCTCCGAAATCGCCATCCGCGTCTTCCGTGCTGCAACAGAGCTCGGCATCTCGACCATCGCGGTCTATGCGGAGGAGGACAAGCTGTCGCTCCACCGCTTCAAGGCGGACGAGGCCTATCAGATCGGCAAGGGCAAGGGGCCGGTGGAGGCCTATCTCTCGATCGACGAGGTGATCCGGGTCGCCAAGGACGCCAGGGCCGACGCCATCCATCCCGGCTACGGCCTGCTTTCGGAGAGCCCGGAATTCGCCGAGGCCTGCGCCGCGGCCGGCGTCGTCTTCATCGGGCCCTCGCCCAAGACGCTGCGCACGCTCGGCAACAAGGTCGATGCGCGCAACCTCGCCGTTTCCGTCGGCGTGCCCGTCATGCCGGCGACCGAGCCGCTGCCCGACGATCCGGAGGCGATCAAGCGGGCGGCGCTGGCGGTCGGCTATCCCGTGATGCTGAAGGCGTCCTGGGGCGGCGGCGGGCGCGGCATGCGGCCGATCGAGAGCGAGGACAAGCTGCTCGATTCGGTGATGACCGCCAGGCGCGAAGCCAAGGCGGCCTTCGGCAAGGACGAGGTCTATCTGGAAAAGCTGGTGCGCCGCGCCCGGCATGTCGAGGTGCAGATCCTCGGCGACAAGCACGGCACGCTGGTGCATCTCTTCGAGCGCGACTGTTCGATCCAGCGCCGCAACCAGAAGGTGATCGAGCGGGCGCCCGCCCCCTATCTCGACCCGGACACCCGCCGGCAGCTCTGCGAGGCGGCGCTGAAGATCGGGCGCGGCACCGACTATGCCGGCGCCGGCACGGTCGAGTTCCTGATGGATGCCGATACCGGCAAGTTCTACTTCATCGAGGTCAACCCGCGCGTCCAGGTCGAGCACACGGTGACGGAGGTCGTCACCGACCTCGACATCGTCAAGGCGCAGATCCGCATCGCCGAGGGCGGGCGCATCGGCAAGCAGCTCGCCGATGGCGCCTACGAGACCGGCATCCCGCCGCAGGCGGAGATCTTCACCCGCGGCCATGCGCTGCAATGCCGCCTGACCACCGAGAATCCGGAGAACAACTTCATCCCGGACTATGGCCGCATCACCGCCTATCGCGGCGCCATGGGCTTCGGCATCCGCATCGACGGCGGCACGGCCTATTCCGGCGCGGTGGTGACGCGCTGGTACGACCCGCTCCTGGAGAAGGTGACGGCCTGGGCCAACACGCCGGCCGAGGCGATCGCCCGCATGGACCGGGCGCTGCGCGAATATCGCATCCGGGGCGTGGCCACCAACCTGCCCTTCCTGGAGGCGGTGCTGAAGCATCCGAAGTTCCGGGCCAACGAGTACACCACCCGCTTCATCGACGAGACGCCGGAGCTGTTCCAGTTCGCCAAGCGGCGCGACCGGGCGACCAAGCTCCTGACCTATATCGCCGACGTCACCGTCAACGGCCATCCCGAGGCGCGCGGCCGCACCCGCCCGCCGGCCGAGGCGCGCACGCCGGTCGCCCCGGTGTTCGCCGGCGAGCTGCAGCCGGGCACCAAGCAGCGGCTCGACGCGCTTGGGCCGGAGAAGTTCGCGGCCTGGCTGCGCGACGAGGCGCGGGTGCTGATCACCGACACCACCATGCGCGACGCTCACCAGTCGCTGCTGGCGACGCGCATGCGCACCCATGACATTGCCGGCGTCGCCGGCGCCTATGCCAGGGGCGTGCCGCAGCTCCTGTCGTTGGAGTGCTGGGGCGGCGCGACGTTCGACGTCGCCATGCGCTTCCTCAACGAGGACCCGTGGGAGCGCCTGGCGCTCATTCGCGAGCGGGCGCCGAACCTCTTGACACAGATGCTGCTGCGCGGGGCGAACGGCGTCGGCTACACCAACTATCCCGACAATGTGGTGAAGCACTTCGTCGCCCGCGCCGCCGCCGCGGGCATGGACCTCTTCCGCGTCTTCGACTGCCTCAACTGGGTGGAGAACATGCGCGTCGCCATCGACGCGGTGCTCGAGGCCGGCAAGCTGGCGGAAGGGGCGATCTGCTACACCGGCGACATCTTCGATCCCGCCCGGGCCAAGTACGACCTCGCCTATTACGTCGAGACGGCCAGGGCGCTGGAGAAGGCGGGCTGCCACATCCTGTGCATCAAGGACATGGCCGGGCTGCTCAAGCCGGCGCAGGCGCGCGCCCTCGTCGGCGCCCTGAAGCGCGAGGTCGGCCTTCCCATCCACCTGCACACCCACGACACCTCGGGCATATCGGGGGCCACGGTGCTGGCGGCGATCGAGGCGGGGGTCGACGCGGTCGACGCGGCGATGGATGCGATGTCCGGCACCACGTCGCAGCCCTGCCTCGGCTCGATCGTCGAGGCGCTGCGCCATACCGGGCGCGACACCGGCCTCGATCCCGAGGCGATCCGGCGCATCTCGTTCTACTGGGAAGCGGTGCGCACCCAATATGCCGCCTTCGAGAGCGACCTCAAGGCCGGCGCCTCCGAGGTCTATCTGCACGAGATGCCGGGCGGGCAGTTCACCAACCTGAAGGAGCAGGCGCGCTCGCTCGGGCTCGACAGCCGCTGGCACGAGGTGGCCAAGGCCTATCGCGCCGCCAACGACATGTTCGGCGACATCGTCAAGGTGACGCCCTCCTCCAAGGTGGTGGGCGACATGGCGCTGATGATGGTGGCGCAGGGCCTGACGCCGGAGGACGTGGTCGACCCCAGGCGCGACGTCGCCTTTCCCGGCTCGGTGGTGGAGATGCTGCACGGCGACCTCGGCCAGCCGACGGGCGGCTGGCCCAAGGGGCTGCAGGCCAAGGTGCTGAAGGGCGAGGCGCCGATCACCGTGCGTCCGGGCTCGCTGCTGGCCGCGGCCGACCTCGGCAAGGCCAGGGCCGAGGCCGAGGGCAAGATCGGGCGGGCGATCGACGAGAACGAGCTCGCCTCCTACCTGATGTATCCCAAGGTCTTCATCGAATATGCCGGGGCCATGCGCAAATACGGGCCGGTCTCGGCCCTGACGACGCCGGTGTTCTTCTATGGCATGACGCCCGGGGACGAGCTCACCATCGAGATCGAGCGCGGCAAGGCGCTGCTCATCCGCCTCCTGACCCTGGGCGAGACCGACGACGAGGGCCAGGTCCGTGTCTTCTTCGAGCTCAACGGCCAGCAGCGCATCATCCGCGTGCCCAACCGCTCGGTCGTCGCCAAGGTCCAGGCCCGCCGCAAGGCGGACGAGGGCAACGAGGCCCATGTCGCCGCGCCGATGCCCGGCGCCGTCTCGACGGTGGCGGTCAAGGCCGGCCAGCCGGTGAAGACCGGCGACGTGCTGCTCACCATCGAGGCGATGAAGATGGAAACGGCCCTGCACGCCGCCCGGGACGGCACGGTGTCGGAGGTGCTGGTGACGCCGGGCGCCCAGATCGACGCCAAGGACCTCCTGGTGGTGCTGGGGTAG
PROTEIN sequence
Length: 1154
MRPPFRRLLVANRSEIAIRVFRAATELGISTIAVYAEEDKLSLHRFKADEAYQIGKGKGPVEAYLSIDEVIRVAKDARADAIHPGYGLLSESPEFAEACAAAGVVFIGPSPKTLRTLGNKVDARNLAVSVGVPVMPATEPLPDDPEAIKRAALAVGYPVMLKASWGGGGRGMRPIESEDKLLDSVMTARREAKAAFGKDEVYLEKLVRRARHVEVQILGDKHGTLVHLFERDCSIQRRNQKVIERAPAPYLDPDTRRQLCEAALKIGRGTDYAGAGTVEFLMDADTGKFYFIEVNPRVQVEHTVTEVVTDLDIVKAQIRIAEGGRIGKQLADGAYETGIPPQAEIFTRGHALQCRLTTENPENNFIPDYGRITAYRGAMGFGIRIDGGTAYSGAVVTRWYDPLLEKVTAWANTPAEAIARMDRALREYRIRGVATNLPFLEAVLKHPKFRANEYTTRFIDETPELFQFAKRRDRATKLLTYIADVTVNGHPEARGRTRPPAEARTPVAPVFAGELQPGTKQRLDALGPEKFAAWLRDEARVLITDTTMRDAHQSLLATRMRTHDIAGVAGAYARGVPQLLSLECWGGATFDVAMRFLNEDPWERLALIRERAPNLLTQMLLRGANGVGYTNYPDNVVKHFVARAAAAGMDLFRVFDCLNWVENMRVAIDAVLEAGKLAEGAICYTGDIFDPARAKYDLAYYVETARALEKAGCHILCIKDMAGLLKPAQARALVGALKREVGLPIHLHTHDTSGISGATVLAAIEAGVDAVDAAMDAMSGTTSQPCLGSIVEALRHTGRDTGLDPEAIRRISFYWEAVRTQYAAFESDLKAGASEVYLHEMPGGQFTNLKEQARSLGLDSRWHEVAKAYRAANDMFGDIVKVTPSSKVVGDMALMMVAQGLTPEDVVDPRRDVAFPGSVVEMLHGDLGQPTGGWPKGLQAKVLKGEAPITVRPGSLLAAADLGKARAEAEGKIGRAIDENELASYLMYPKVFIEYAGAMRKYGPVSALTTPVFFYGMTPGDELTIEIERGKALLIRLLTLGETDDEGQVRVFFELNGQQRIIRVPNRSVVAKVQARRKADEGNEAHVAAPMPGAVSTVAVKAGQPVKTGDVLLTIEAMKMETALHAARDGTVSEVLVTPGAQIDAKDLLVVLG*