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berkeley_reactor_200306_biofilm_scaffold_8117_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22608..23303

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQT7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 216.0
  • Bit_score: 161
  • Evalue 7.60e-37
DNA-binding transcriptional regulator CsgD {ECO:0000313|EMBL:CEJ11718.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 223.0
  • Bit_score: 219
  • Evalue 2.50e-54
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 205.0
  • Bit_score: 110
  • Evalue 3.30e-22

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCTTCGAGCGAGCTTCGGAAAAGGCAATTCATCGAGACGACATTCCAATTGCTGAACGGCGCCCTGGAGGCGAGCCGCCTCGTCTTCTATTCCGTCGATCGCGAGCACAACCTGCACAATTTCGTCTGCTCGCGCGTTCCCGCGGACTTCATCCGCATCTATGTCCGGGAAATGCATGCCGTGGATCCGCTGCATGTCCGCCGTCTGCGCTCGCCGGACGAGCGCGTGGTGCGGATGGACCGGGCCTCCAGGGACATGCCGCTGCAGGAGGTGCGGGAATACGAGACCTTTCTGCGGCGCTTCGACGTCGTCGACAATATCGACTTCATCTTCCACCATGACGACGAGATCAAAGCCGGCCTCAGCGTGATGTGGACGTCCAGGGATCCGCGCCCGACGCCGGTGCTGTTCCGGCTGGCCGACGAGCTGCAGCGCTATATCGAGTTCAACATGTCGGACCACATGGCGCCGAGCCGGGATGATCGCGCCGCGAGGGCGGCCCGCATGTTCCATCTCACCCGGCGGGAGGCCGAGGTCGCGGGGCTGCTGTGCTGCGGGCGGACCAATGCCGACATCGCCGCCTGCCTCGGCATCGGCCTTGCCACCGTCAAGACGCATCTGATCCACATCTTCGAGAAGACCGGCGTGGAGAACCGCTCCGGCCTGGTGGCCCGCCTGGCGGCGCCGCACTGA
PROTEIN sequence
Length: 232
MASSELRKRQFIETTFQLLNGALEASRLVFYSVDREHNLHNFVCSRVPADFIRIYVREMHAVDPLHVRRLRSPDERVVRMDRASRDMPLQEVREYETFLRRFDVVDNIDFIFHHDDEIKAGLSVMWTSRDPRPTPVLFRLADELQRYIEFNMSDHMAPSRDDRAARAARMFHLTRREAEVAGLLCCGRTNADIAACLGIGLATVKTHLIHIFEKTGVENRSGLVARLAAPH*