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berkeley_reactor_200306_biofilm_scaffold_8117_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27743..28846

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, nucleotide binding/ATPase protein (Spermidine/putrescine) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWV8_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 443
  • Evalue 1.20e-121
potA; Spermidine/putrescine ABC transporter permease/ATPase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 443
  • Evalue 3.50e-122
ABC transporter, nucleotide binding/ATPase protein (Spermidine/putrescine) {ECO:0000313|EMBL:ADZ71535.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 443
  • Evalue 1.70e-121

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGCAGCCACGAGCACGTGTGAACCCGCCCAGCCGATCCTCCAGCTTCGCGGCGTCGACAAGCTCTTCAACGACTTCCCGGCCGTCGACCGCATCAATCTCGACATCTACGAAGGCGAGTTCTTCACCATCGTCGGGCCGTCGGGCAGCGGCAAGACCACGATGGTGCGCATGCTGGTCGGCATGGACAAGCCGACGAACGGCGACATCCTGCTGCGCGGGACCCGCATCAACGACGTCCCCGCCAACAAGCGGCCGACCTGCATGGTGTTCCAGTCGCTGGCGCTGTTTCCCCACCGCACCGTCGGGCAGAACATCGAGTTTCCGCTGAAGATCAAGGGCGTGGCGCCCGACCGGCGCAAGGCGCGGGCGCTGGAGCTGATGGCCCAGCTCCGCCTGCCGGAGAGCTATTACGGCAAGGGCGTGCTGCAATGCTCGGGCGGCGAGCGCCAGCGCGTGGCGCTGGCCCGGGCGCTCGCCTTCGATCCCGACATCCTGTTCTTCGACGAGCCCTTGTCGGCGCTCGATTACCGCCTGCGCAAGCTCCTGGAGAAGGAGCTCAAGGACATCCATCGCGAGACCGGCAAGACCTTCGTCTACATCACCCATTCGCTCGAGGAGGCGATGGTGATGTCGGACCGCATCGGCGTCATGAACAAGGGCCGCTTCGTGCAGATCGGCACGCCGCACGACATTTACGGCAGCCCGCACAACCGGTTCGTCTCCGAGTTCATGGGCGAGGTGAACGTCGTCGAGGTGCGGCGCAGGGAGGACGGCGCGCTGGTCGACGAAGCGTCGGGCCAGGCGTACCGCACGCCGGGCGTCGCCGGCGAGTTCGAGGCCGGCACGCTGGTCGTGCGCCCGGAGGATGTCCGCTTCGTGCAGGCGGGCGCGCCGGCCGACAATCAGATGTCCGGCACCCTCTACAACGAATATCTCCTGGGCTCGCGCGTCCAGTACCAGGTCAGGGTCGGGGAGGCCCAGGTCTTCCTGGTCGAGAAGCTGCGCGAGCAGCGCTTCGAGGGAAGGCTGGGAGATCCGGTCGTCATCGGCTGGGACGCCAAGGACTCGATGATCTTCCCGACCAACCGGCTGCAGCAATAG
PROTEIN sequence
Length: 368
MAATSTCEPAQPILQLRGVDKLFNDFPAVDRINLDIYEGEFFTIVGPSGSGKTTMVRMLVGMDKPTNGDILLRGTRINDVPANKRPTCMVFQSLALFPHRTVGQNIEFPLKIKGVAPDRRKARALELMAQLRLPESYYGKGVLQCSGGERQRVALARALAFDPDILFFDEPLSALDYRLRKLLEKELKDIHRETGKTFVYITHSLEEAMVMSDRIGVMNKGRFVQIGTPHDIYGSPHNRFVSEFMGEVNVVEVRRREDGALVDEASGQAYRTPGVAGEFEAGTLVVRPEDVRFVQAGAPADNQMSGTLYNEYLLGSRVQYQVRVGEAQVFLVEKLREQRFEGRLGDPVVIGWDAKDSMIFPTNRLQQ*