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berkeley_reactor_200306_biofilm_scaffold_8117_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 28868..29800

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component I n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2P7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 290.0
  • Bit_score: 300
  • Evalue 1.80e-78
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:EIQ01539.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 290.0
  • Bit_score: 300
  • Evalue 2.60e-78
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 290.0
  • Bit_score: 297
  • Evalue 3.40e-78

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 933
ATGGTCGATGCCAGCCAGGTGATGGTCGGGACCGAGGCCGGCGCGGCGCCGGCGAGCCGCGAGCGGCGGCGCCTGCCGGCCTGGCGCGAGCGCCTGAGGGAGCCCGGCTTCCTTGCGGCCGTGCCGATCGGCCTGCTCCTGGTGGCCGGCTTCCTCGGGCCGCTGGTGCTGGTGATCGTCTTCGCCTTCATGCCGGCTGGTTCCTTCTCGATCCTCCAGGTCCCGACGCTCGCCAACTTCGCCGACATCCTCGCCTCGTCCTATTATCTCTCCTTTTTGTCCTCGCTGTTCCTCGCCGCCGTCACCGTCGCGATCCTGCTGGTCGTCTGCTATCCCCTCGCCGTCGCCATGGTCCGGGTCTTCGGCAAGCAGGGCAGCCTCCTCACCCTCCTGATCACGGCGCCGCTCTTCGTCGCGGACAACCTGCGCCTGACCGGCTGGATGCTGTTCCTGGTCAAGGGCGGGGTGGTGTCGGGCTCGCTGCAGAGCGCCTTCGGCGTGGAGCTCGATTCCATGCTCTACACCACCGGCGCGACGCTGTTCGGCCTGGTCTACATCTACCTGCCCTTCATGCTGTTCCCGATGGTCCTCGGCGTCGCCATGGTGCCGCCGCAGACGCGCGAGGCGGCCTTCGACCTCGGCGCCAACCGCTTCCAGATCATGCGCGAGGTCGACATCCCGCTCGCCATGCCCGGCATCCTGATCGGCGGCCTGATGTGCTTCATCCTGACCGCCGGCGCCCTCACCGAGGCGAAGGTGCTGGGCGGCACCGCCGTGGTCACCATCGCGCAGGACATCCAGAAGGAGTTCACCTTCGCGCAGAACTGGCCGCGGGGCTCGGCCCTGTCGGTCCTGATGATCCTTCTGGCCGGAGGGCTCTCGGTGGCGCTGTTGAAGCGGATCGACCTCGACGGCATCTTCGGGCGGAGATAG
PROTEIN sequence
Length: 311
MVDASQVMVGTEAGAAPASRERRRLPAWRERLREPGFLAAVPIGLLLVAGFLGPLVLVIVFAFMPAGSFSILQVPTLANFADILASSYYLSFLSSLFLAAVTVAILLVVCYPLAVAMVRVFGKQGSLLTLLITAPLFVADNLRLTGWMLFLVKGGVVSGSLQSAFGVELDSMLYTTGATLFGLVYIYLPFMLFPMVLGVAMVPPQTREAAFDLGANRFQIMREVDIPLAMPGILIGGLMCFILTAGALTEAKVLGGTAVVTIAQDIQKEFTFAQNWPRGSALSVLMILLAGGLSVALLKRIDLDGIFGRR*