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berkeley_reactor_200306_biofilm_scaffold_10683_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(14150..15097)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDFDAE related cluster n=1 Tax=unknown RepID=UPI0003CDFDAE similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 317.0
  • Bit_score: 419
  • Evalue 1.60e-114
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW90155.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 317.0
  • Bit_score: 419
  • Evalue 2.30e-114
ribose ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 317.0
  • Bit_score: 418
  • Evalue 1.00e-114

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGACATTCACGCGTCGCAACGTCCTGACGGTCATCGCCGGCGCCGCCGGCGCCTCGATCGCCGGCGTCGAAATGCCGGCCTCCGCGGCCGAGAAGATCAAGATCGGCTTCAGCCAGTGCACGCTCAACCATCCCTGGCGTGTCGCGCAGACCAATGTCAACAAGGCCTATGCCGACGACAAGCTCAGCGATGTCTCGCTGATCATCACCGACGGCAACAACGACTCGGGCAAGCAGGTGTCCGACATCGAGAATCTGATGGCCCAGGGCGTCAAGGTGTTGATGATCTCTCCCCTGACCGCCGATGCGCTGACGCCGATCGTCCGGCAAGCCATGGAAAGCGGCATTCCGGTGGTGACGCTCGACCGCAAGGTCAACACCAAGGTGACCTGCCATATCGGCGCCCTGAACCTGCCGATCGCCGCCGCCGCCGCGGCGCTGCTGGCCAGGAAGCTGGACGGCAAGGGCGCGATCATCGAGCTGCAGGGCACCGCCGGCGCGTCCGCGACGGTCGATCGCAACAAGGGCTTCGTCGACGAACTCGCCAAGACCCCCGGTCTCAAGATCGTGGCGAGCCAGAACTGCGACTACACCCGCGACAAGGCCGTCAAGTTCATGGAAGACATGGTGCAGCGCTTCGGCGAGGGCCAGATCCAGGCGGTCTATGCGCACAACGACGAAATGGCGCTCGGTGCGGTCCAGGTGCTGGAGGGCGCCGGCCGGTTGAAGGACGTGCTCGTCATCGGCATCGACGGCCAGAACAACGCCATCGAAGCGGTCGCCGCAGGAAAGCTCGCTGCAACCTTCACCTATCCCTATGTCGCCCCGGAAGGAATCCAGTACGCCCACAAGATCGCCAGTGGCGAGAGCGTGCCGGAGGTCGTCCTGCTCGATTCCGTCGCCATCACGGCCGATAATGCGAAATCCATGATCGGGAAGGGGTTCTGA
PROTEIN sequence
Length: 316
MTFTRRNVLTVIAGAAGASIAGVEMPASAAEKIKIGFSQCTLNHPWRVAQTNVNKAYADDKLSDVSLIITDGNNDSGKQVSDIENLMAQGVKVLMISPLTADALTPIVRQAMESGIPVVTLDRKVNTKVTCHIGALNLPIAAAAAALLARKLDGKGAIIELQGTAGASATVDRNKGFVDELAKTPGLKIVASQNCDYTRDKAVKFMEDMVQRFGEGQIQAVYAHNDEMALGAVQVLEGAGRLKDVLVIGIDGQNNAIEAVAAGKLAATFTYPYVAPEGIQYAHKIASGESVPEVVLLDSVAITADNAKSMIGKGF*