ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_18395_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7995..8795

Top 3 Functional Annotations

Value Algorithm Source
DeoR faimly transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E7F6BA similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 253.0
  • Bit_score: 339
  • Evalue 1.80e-90
GlpR protein {ECO:0000313|EMBL:BAQ45639.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 256.0
  • Bit_score: 349
  • Evalue 3.20e-93
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 252.0
  • Bit_score: 335
  • Evalue 7.30e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGCTCGCCGCCAACGATCGCCAGGACGACATCGTCACGCTCGCCCGCGCCGTCGGGCGCGTCAGCGTCGATGACCTCGCCGCCCGCTTCGAGGTCTCGCCGCAGACCATCCGCAAGGACCTCAACGACCTCTGCGAGAAGCGCATCCTCACCCGCGTCCATGGTGGGGCGATCATCGCCTCCTCGATCGAGAACGTCTCCTACGAGGCGCGCAAGCTGATCGGCGCGGAGGAGAAGCGCCGGATCGGCCGGGCCGCCGCGGCGCTGATCCCCAACAAGTCCTCGCTGTTCATCAATATCGGCACCACCACCGAGGAGGTGGCGGCCGGCCTGCACGCCCACGAGGGCCTGCTGGTCATCACCAACAATCTCAACGTCGCCACCGGACTCTACCGCAACCCGAAGATCGACGTGATCGTCGTCGGCGGGCCGGTGCGCTCGGACGGGGCGGTGATCGGCTCGGTGGCGGTCGACCTGATCCACAAGTTCAAGGTCGACACCGCCGTGATCGGCGCCTCGGCCATCGACGAGGACGGCACGCTGCTCGACTTCGACTACGAGGAGGTCAAGGTGGCGCAGGCGATCATCCAGAACGCCCGCCGGGTGATCCTGGTGGCCGACCGCCTGAAGTTCGAGCGCGCCGCGCCGATCCGCATCGCCAACCTTTCCGAGGTCGACGCCTTCGTCACCGACCGCCTGCCCAGCGAGGAGATGCGGGCGCTCTGCCAGGCGCACGGGGTGTCGGTGGTGGAGACGGCGGTGGAGGGGGTGGGGGCGAGGCGTCCGCTGGAAGACGGGTAG
PROTEIN sequence
Length: 267
MLAANDRQDDIVTLARAVGRVSVDDLAARFEVSPQTIRKDLNDLCEKRILTRVHGGAIIASSIENVSYEARKLIGAEEKRRIGRAAAALIPNKSSLFINIGTTTEEVAAGLHAHEGLLVITNNLNVATGLYRNPKIDVIVVGGPVRSDGAVIGSVAVDLIHKFKVDTAVIGASAIDEDGTLLDFDYEEVKVAQAIIQNARRVILVADRLKFERAAPIRIANLSEVDAFVTDRLPSEEMRALCQAHGVSVVETAVEGVGARRPLEDG*