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berkeley_reactor_200306_biofilm_scaffold_18395_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9047..9523)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type ribose transport system, auxiliary component n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TG78_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 148.0
  • Bit_score: 240
  • Evalue 6.70e-61
Putative ABC-type ribose transport system, auxiliary component {ECO:0000313|EMBL:CCE05466.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 148.0
  • Bit_score: 240
  • Evalue 9.50e-61
ribose ABC transporter similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 149.0
  • Bit_score: 233
  • Evalue 2.30e-59

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCTCAAGAGACTCGACCCGCTGCTCAACGCCGACGTGCTCTATGCCCTCAGGGCCATGGGCCATGGCGACGAGCTGGTGATCGTCGACACCAATTTTCCCGCCGAGAGCGTCTCCCGCCAGACCGTGCTCGGCGACCTCTTGCGCATCGACGGCGTCAGCGCCGCCCGGGCCGCGCGCGCCGTGCTGTCGGTGATGCCGCTCGACACCTTCGTCGACGACGCCGCCATGCGCATGGAGATCGTCGGCAACCCCGGCGAAATCCCGGCGGTGCAGGCCGAGGTCCAGGCCGAGATCGACCGGGCGGAGGCCAAGTCCTGGCCGATGGGCTCGATCGAGCGCATGGCCTTCTACGAGCGGGCCAAGCAGGCCTATTGCGTCATCGCGACCGGCGAGACCCGCTTCTACGGCTGCTTCATCTTCAAGAAGGGCGTGATCCCGCCCAAGCAGAACGTGCTCAAGCCCAAGAAGGGGTGA
PROTEIN sequence
Length: 159
MLKRLDPLLNADVLYALRAMGHGDELVIVDTNFPAESVSRQTVLGDLLRIDGVSAARAARAVLSVMPLDTFVDDAAMRMEIVGNPGEIPAVQAEVQAEIDRAEAKSWPMGSIERMAFYERAKQAYCVIATGETRFYGCFIFKKGVIPPKQNVLKPKKG*