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berkeley_reactor_200306_biofilm_scaffold_21758_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3217..4521)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator family transporter n=2 Tax=Pseudomonas RepID=F0E7J8_PSEDT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 419.0
  • Bit_score: 572
  • Evalue 2.10e-160
MFS transporter {ECO:0000313|EMBL:KGM34504.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 430.0
  • Bit_score: 638
  • Evalue 5.60e-180
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 418.0
  • Bit_score: 570
  • Evalue 3.80e-160

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGGCATCAACCGATGTGACCGACGCGATCGCGGCGGATCTCCTGCCGAACCGGCCGCTCGCCGCCGCCGACTACCGCACCCTCGCCCTGGCCGCGCTCGGCGGCGCGCTCGAGTTCTACGACTTCATCATCTATGTCTTCTTCGCCACCATGATCGGGCAGTTGTTCTTCCCGCCCGACAGTCCCGACTGGCTGCGCCAGGTGCAGACCTTCGGAGTCTTCGCGGTCGGGTATTTCGTGCGTCCGCTCGGCGGCATCGTCATGGCGCATTTCGGCGACGTCGCCGGCCGCAAGCGCATGTTCACGCTCTCGATCTTCCTCATGGCCGTCTCGACGCTCGGCATGGGCCTGCTGCCGACCTATGCCACGGCCGGCGCGCTGGCCCCTGTCGCGCTCGTGCTCCTGCGCATCGTCCAGGGCGCGGCGATCGGCGGCGAGGTGCCGGGCGCCTGGGTGTTCGTGGCCGAGCACGTGCCGGCCCGGCGCGTCGGCTTTGCCTGCGGCGTGCTGACGGCCGGGCTGACGGTCGGCATCCTGCTCGGCTCCCTGGTCGCGGGCGCCGTCAACGCCGCCTTCGCCCCGGCCGGGATCGCCGCCTGGGCCTGGCGGCTGCCCTTCCTCCTCGGCGGCGTGTTCGGCCTCGCCTCGGTGCAGCTGCGGCGTCTCCTGGAGGAAACGCCGATCTTCCGCGAGATCCAGCAGCGCAAGGCCCTGGCCGCCGAGCTGCCGCTCAAGACGGTGCTGCGCGGCCATCGCGGCGCGGTGGTGCTGTCGATCCTGCTGACCTGGCTGCTCTCGGCCGCCATCGTGGTGGTCATCCTGATGACGCCGGCGCTCCTGCAGAAGCAGGGCATCCCGCTGCCGGCAGCGCTCGCCGCCAACAGCGTCGCCACCATCGGCCTTACCATCGGCTGCATTCTCGCCGGCGCGCTGATCGACCGGATCGGCGCCGGACGCTTCTTCCTGGCGGGCTGCCTCCTGCTGGCCGCGGCGGTCTTCCTGTTCTACACGCGCGTCGGCGCCGAGCCGGCGCTGCTCGGCCCGCTCTACGGCCTCACGGGCCTGTGCGTCGGCGTGGTCGGCGGCGTGCCCTTCGTCATGGTCCGCGCCTTCCCCGCGGCGGTGCGCTTCACTGGCGTCTCCTTCTCCTACAACGTCGCCTATGCCGTGTTCGGCGGCCTGACACCGCTGGTGGTGCCGCTGCTGATGGCCGTCAATCCGCTGGCGCATCTCTACTACGTGCTGGCGCTCTGCGCGCTCGGCTGCGGCATCGGCCTCTGGCTGCTGGCTGCGGGGCGCGGCTGA
PROTEIN sequence
Length: 435
MASTDVTDAIAADLLPNRPLAAADYRTLALAALGGALEFYDFIIYVFFATMIGQLFFPPDSPDWLRQVQTFGVFAVGYFVRPLGGIVMAHFGDVAGRKRMFTLSIFLMAVSTLGMGLLPTYATAGALAPVALVLLRIVQGAAIGGEVPGAWVFVAEHVPARRVGFACGVLTAGLTVGILLGSLVAGAVNAAFAPAGIAAWAWRLPFLLGGVFGLASVQLRRLLEETPIFREIQQRKALAAELPLKTVLRGHRGAVVLSILLTWLLSAAIVVVILMTPALLQKQGIPLPAALAANSVATIGLTIGCILAGALIDRIGAGRFFLAGCLLLAAAVFLFYTRVGAEPALLGPLYGLTGLCVGVVGGVPFVMVRAFPAAVRFTGVSFSYNVAYAVFGGLTPLVVPLLMAVNPLAHLYYVLALCALGCGIGLWLLAAGRG*