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berkeley_reactor_200306_biofilm_scaffold_21758_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23814..24377)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1M7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 186.0
  • Bit_score: 284
  • Evalue 4.80e-74
Uncharacterized protein {ECO:0000313|EMBL:EYR81574.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 186.0
  • Bit_score: 284
  • Evalue 6.80e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 186.0
  • Bit_score: 267
  • Evalue 1.70e-69

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATCACCTTCAACAACGACCTCGACGCCGACTATGCCTCGCTCGAGGCCTTCTCCGCCTTCCGCGCCGACGCCTCCGCCAACCGGTTCAAGTACTTCCTCGAAGTCTTCAACCCCAATGTCGACACCGGCATCGACCCCGCCCTCCTGCCCCATTACGTCAACGATTGCATCCTGCGCTGCATCGCCGGCGTCACCCAGGCCCAGCGCCCCGAATTCCTCAAGATCGCCTATAACGGCCCCAAGGCCCTGGAGGAGCTCGCCGGCTTTGATCCCGGCGTCATCGTCGGCGTGCTCGGCGGCGGCGCCGGCACCACCCGCGACTGCTTCGAGCTCCTGGCCCAGGCCGAGAGATACGGCGCCCGCGTCGCCCTGTTCGGCCGCAAGATCAACCTGGCCGAGAGCCCCCTCGACATGGTCGCCACCATGCGCGAGGTCGCCTCCGGCAATCTCGCGCCGTCGGAAGCCGTCCGCGCCTATCACGGCGCCCTGCAGAGGCAGGACATCAAGCCCACCCGCGACCTCGCCGACGACGACGTCGTCACCGAGGCCGTGCTGAAGGGCTGA
PROTEIN sequence
Length: 188
ITFNNDLDADYASLEAFSAFRADASANRFKYFLEVFNPNVDTGIDPALLPHYVNDCILRCIAGVTQAQRPEFLKIAYNGPKALEELAGFDPGVIVGVLGGGAGTTRDCFELLAQAERYGARVALFGRKINLAESPLDMVATMREVASGNLAPSEAVRAYHGALQRQDIKPTRDLADDDVVTEAVLKG*