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berkeley_reactor_200306_biofilm_scaffold_24673_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(199..1209)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003810162 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 327.0
  • Bit_score: 505
  • Evalue 4.10e-140
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM31110.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 332.0
  • Bit_score: 522
  • Evalue 3.50e-145
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 334.0
  • Bit_score: 498
  • Evalue 1.40e-138

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGGCAACCATCAAGGACGTGGCGAAGGCAGCCGGCGTGTCGACGGCGACGGTCTCGGCGGTGCTCAACGACACCGCCTATGTCAGCCCGCCGCTGCGCGCCCGGGTGCTCTCGGCGGTGAGCGCGCTCGACTATGCCCCGCTGCTGGCGGCCAAGAACCTCAGGCGCGGCCGCAGCCAGCTGATCGCCCTGGTCGTCGCCGACCTCGCCAATCCCTTCTTCGCCCGCCTGGTGGTGGCGGCCGAGGCGGCGGTGGCGGCCTGGGGCTATGCGCTGGTGCTGTTCAACAGCGACGAGAAGCCGGACAACGAGCGGCGCATCCTGACGCGCATCCGCACGTTGTCCTGCGACGGGGCGGTGCTGGTGCCGGTCGGCAATGCCGCCCACCGGGTGCAGCGCGACTTCGAGGGCAATGCCATGCCGATGGTGCTGTTCGGGCGCGTGGTCGACGACGACCGCTCCGACACGGTGACGATCGACAACGTCTCGGCGGCGCGCCAGGTCGCCACCTATCTCATGGACCTCGGCCACCGCCGCATCGGCACCATCACCGGGCCGCTGCACCTCACCACCGGACGCGGGCGCCTCGACGGGATGCTCGAGGCGATGCAGGCGCGCGGCCTCGCGCCGCAGCCCGGCCATGTCCGCTGCGGCGAGTTTCGCGAGGACGTCGCCTATTCCGTCGCCCGCGAGATGCTGGAGCGGCCCGACCGGCCGAGCGCGCTCTATGCCGCCAACGGCGTCATGGCGCTCGGCGTGATGCGGGCCATGGCCGATCTCGGCCTGAAATGCCCGGAGGACGTGTCGATCGCCTCGACCGACACCATCCCCGGCATCGGGGGCCTCCGGCCGCGCCTCACCCGCACCGAGCATCCCGTGACCGACATGACCAACGAGGCGCTGCGCCTCCTGGTCGACCGCATTAGCCGCGGCAACGACGTGCCGCCGCGCAACGTCGTGTTCCAGCCGACCCTGGTGCTGGGCGAGAGCTGCGGGCCGGTCGTGGCCTAA
PROTEIN sequence
Length: 337
VATIKDVAKAAGVSTATVSAVLNDTAYVSPPLRARVLSAVSALDYAPLLAAKNLRRGRSQLIALVVADLANPFFARLVVAAEAAVAAWGYALVLFNSDEKPDNERRILTRIRTLSCDGAVLVPVGNAAHRVQRDFEGNAMPMVLFGRVVDDDRSDTVTIDNVSAARQVATYLMDLGHRRIGTITGPLHLTTGRGRLDGMLEAMQARGLAPQPGHVRCGEFREDVAYSVAREMLERPDRPSALYAANGVMALGVMRAMADLGLKCPEDVSIASTDTIPGIGGLRPRLTRTEHPVTDMTNEALRLLVDRISRGNDVPPRNVVFQPTLVLGESCGPVVA*