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berkeley_reactor_200306_biofilm_scaffold_24673_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1399..2346

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000377D03E similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 304.0
  • Bit_score: 483
  • Evalue 1.20e-133
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31109.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 306.0
  • Bit_score: 510
  • Evalue 1.70e-141
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 313.0
  • Bit_score: 472
  • Evalue 6.00e-131

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTCACGCTGGACATGGAGAGTTGCGGTCGCCGCCGGCCTGGCGCTGGCGGCGGGACAAGCGCCGGCGGCGGACGGGCCGCTGCTCGGCATCGTCTCGATCGCCGCCACCGAGGCCAACAATGTGCGCTACATCGCCGGCGCCTCGGCCGCGGCCAAGGAGGAGGGCTGGACCGTGTCGGTGATCGATGCGGCCGGCAGCGCCGACCAGGCCAATGCCGCCATCCAGAACTTCGCCGAGCGCGGCGCCGGCGCCATCATCGACATGGTGTTCCCCTGGTCCTCGATCGGGGCGGGTCTCGCCGCCGCCAAGGCGGCGAACATCCCGGTCGTGACCTGGGGCGGCGGCCTCGGCGGCGCCGTCGCCGCCACCAACGGCTCGGGCGCCCCGATCGCCGAGCCGGTGATCGAGAAGCTGGCGGCCGATCTCGGCGGCAAGGGCGCCGTGCTGGCGCTGACCTACCGGACCGGCGAGGTCTGCCGCAACCGCGAGGTGCTGTTCGACCAGATCCTGGCCAAGCACCCCGAGATCAGCATCACCAAGAACGAGGTGCGCATCCCCGGCTATTTCGAGGACGGGGCGCAATATGCCAATGCCTGGCTCGCCTCCCATCCCGCCGGCGAGGGCAACCTCGCCATCTGGGGCTGCTGGGACGATCCGGCGATCGGCGCCATCGGCTCGCTGCGCCAGCAGGGCCGCGACGACGTCAAGGTCTATGGCGTCAACGGCAATGCCCAGGCGATCGAGAACATCAAGAACGGCCACATGACCGCCACGGCCTGGGAGGACAGCTATACCGAGGGCTACCGCATGGTGAAGATGCTCAAGGAGATCAAGGCCGCCGGCGCGGGCTGGACGCCCAAGGCGGCCGAGGTGCCGGCGGTGCTGATCACCACGGACACCGTCGCCGATTTCCTCAAGGCGCATCCGGACGCCCTCGGCAAGTAG
PROTEIN sequence
Length: 316
MSRWTWRVAVAAGLALAAGQAPAADGPLLGIVSIAATEANNVRYIAGASAAAKEEGWTVSVIDAAGSADQANAAIQNFAERGAGAIIDMVFPWSSIGAGLAAAKAANIPVVTWGGGLGGAVAATNGSGAPIAEPVIEKLAADLGGKGAVLALTYRTGEVCRNREVLFDQILAKHPEISITKNEVRIPGYFEDGAQYANAWLASHPAGEGNLAIWGCWDDPAIGAIGSLRQQGRDDVKVYGVNGNAQAIENIKNGHMTATAWEDSYTEGYRMVKMLKEIKAAGAGWTPKAAEVPAVLITTDTVADFLKAHPDALGK*