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berkeley_reactor_200306_biofilm_scaffold_24673_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(6484..6879)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZP1_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 110.0
  • Bit_score: 151
  • Evalue 5.80e-34
ArsR family transcriptional regulator {ECO:0000313|EMBL:AJR22473.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 134.0
  • Bit_score: 152
  • Evalue 2.80e-34
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 110.0
  • Bit_score: 151
  • Evalue 1.70e-34

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGATACCAAGGTTCCCGCCGAGCTCGCCCAGACCTGCCTCATCACCCCGGCCAAGGAGGCGCTGGTGCGCGAGATGCTGGCGCGCATCGCCGACAAATGGACGCTGATGGTGGTCGACGCCCTGGAGGGCGAGGCGGAGCTGCGCTTCTCGCGGTTGCGCGAGAAGGTCGAGGGCGTCAGCCAGAAGATGCTGACCAAGACGCTGCGCCAGCTCGAGCGCGACGGCCTGGTGGTGCGGCGCGTCCATGCCGAGATCCCGCCGCGGGTCGACTATCGGCTGACGCCGCTCGGCGAGAGCCTCAGCCATTCGCTCTGCGGCGTGTGGATGTGGGCTGGGACGAATCTCGACGCGGTGGAGCAGGCGCGGGCTGCTTATGACGGGCGAGGTGGGTAG
PROTEIN sequence
Length: 132
MDTKVPAELAQTCLITPAKEALVREMLARIADKWTLMVVDALEGEAELRFSRLREKVEGVSQKMLTKTLRQLERDGLVVRRVHAEIPPRVDYRLTPLGESLSHSLCGVWMWAGTNLDAVEQARAAYDGRGG*