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berkeley_reactor_200306_biofilm_scaffold_24673_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10750..11424

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C134C0 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 218.0
  • Bit_score: 340
  • Evalue 1.20e-90
Transcriptional regulatory protein tctD {ECO:0000313|EMBL:CDX25825.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 224.0
  • Bit_score: 258
  • Evalue 6.20e-66
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 224.0
  • Bit_score: 256
  • Evalue 4.80e-66

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGCATCCTGCTGGCGGAAGACAATCGCGAGCTCTCGCAATGGATCGCCCGGCTGCTCCGGCGCGACAACTACGTCATCGACTGCGTGCATCGCGGCGACGAAGCCGATGCGGCCCTCGCCAGCCAGGACTATGCCCTGGTCATCCTCGATCTCGGCCTGCCGCATCTCGACGGCATCGAGGTGCTGAAGCGCCTGCGCCGGCGCGGCCGGACCACGCCGGTGATCATCCTTACCGCCAACGACGCAGTGTCGAGCCGGGTGCAGGGCCTGGACAGCGGCGCCGACGACTATCTCATCAAGCCGTTCAACGTCGAGGAATTCGAGGCCCGCATCCGCGCCCAGCTCCGGCGCGGGCGCAGCACCTTCGATCCCCTCGTGCGCTTCGGCACCCTCGGCTACGACACCCAGGGCCGCGCCTTCAGCGTCAACGGCACGGCGCTCCACCTCACGGCGCGCGAGCACGCCGTGCTGGAGACCCTGATCCTGCGCGCCGGCCGGCCGGTGCCCAAGGACGTCCTCACCGACAGCGTGTTCGGCTTCGACGACGAGGCCAACCCCAACGCGCTCGAGATCTGCGTGCATCGCGTCCGGCGCAAGCTGGAAGGCAGCGGCGTCGCCATCGCCACGCTGCGCGGCCTCGGCTACGTCCTGAGGATCGCCGATGGCGCCTAG
PROTEIN sequence
Length: 225
MRILLAEDNRELSQWIARLLRRDNYVIDCVHRGDEADAALASQDYALVILDLGLPHLDGIEVLKRLRRRGRTTPVIILTANDAVSSRVQGLDSGADDYLIKPFNVEEFEARIRAQLRRGRSTFDPLVRFGTLGYDTQGRAFSVNGTALHLTAREHAVLETLILRAGRPVPKDVLTDSVFGFDDEANPNALEICVHRVRRKLEGSGVAIATLRGLGYVLRIADGA*