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berkeley_reactor_200306_biofilm_scaffold_24673_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21447..22778)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 433.0
  • Bit_score: 407
  • Evalue 1.30e-110
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VVC5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 433.0
  • Bit_score: 407
  • Evalue 8.90e-111
two-component sensor histidine kinase protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 432.0
  • Bit_score: 399
  • Evalue 6.90e-109

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGAGGTCGCTGCGGCGCGAAGCCCTGCTGTGGCTGTCGGGGCTGCTCGGCGTGCTCGGTGTCGCCAGCGCCGCCTCGTCCTATTACCTCGTCCAGGACGAGACCAACAGCTTCCTCGACAGCCAGCTCCGCCAGATCGCCTATTATGTCGACGACACGCCGAGCGTGCCGGTGCGCCCGACGCCGGACGACCCGCTCTACGAGCCGGAGGACGACTTCCTGGTGCAGATCTGGGATGTCGCCGGCCGCTCCATCCTCGCCTCGGACCCGGGCGTGCCCATCGTCCGGCGAACCACCACCGGCTTCTCGAACGAGACGACCCCGAGCGAGACCTGGCGGACCTTCACCTATGTCACGCCGCAGCGCACGGTGCAGATCTCGCAGCGCCTCAGCGTGCGCGAGGAGTTGGCGAGGGACTCGGCCTTGCGCTCGGCCCTGCCGGTGGTCGTGCTCATCCCGCTGTCCTGGCTGCTGCTCGGCTTCGTCATCGACCGGGTGATGCGCCGCCTCGATCGCCTCGCCGCGGTGGTCGGCGCGCGCGAGGCCGACAGCCGCGAGCCGATCCCGCTCCGGGACGTGCCGCGCGAGGTCGTCCCCCTGGTGCGCGCGATGAACGATCTGCTCGACCGCCTCGGCCGGGCCCTGGAGCGGCAGCGCCGCTTCGTCTCCGACGCCGCGCACGAATTGCGCACGCCGCTCGCGGCCCTGCAGCTGCAGATCGGCAATGTCAGGGGCGTCGCCAAGGGACGGGACCTGCTGTCGCGCCTGGCGGATCTCGAGGCGGGAGCACGCCGAGCCTCGAACCTGGTGGCGCAATTGCTGCGGCTGGCGCGCTACGACGCGGATCACCGCCCGGCGCCCGCTGATGTGCTGGACCTGACGGCGCTGGTGGAAGACTGCGTCCGCGAGATCGCGCCGGTGGCGGCGGCTGCCGGCCTCGCCGTCGCGATCAAGGCGGGAACGGCCCTGCGCCTGCGCGGAGTGGCGTCGGAGCTGCGCATCCTGATCGCCAACCTCCTGGACAATGCGGTGCGCTACACGCCGCGCGGCGGCACCATCGAGATCGAGGCCGGGATCGGAGCCGACGGAAACGGTCTGGTCGAGATCCGCGACAGCGGCCCCGGCATCCCTGAGCAGCTCAGGGACCGCGTGTTCGAGCGCTTCTTCCGGGCCTCGGCGCCGACGATCGAAGGCAGCGGCCTGGGGCTGGCGATCGCCCGGTCGATCGCCGAGCATCACGGCATCGCCATCGTGCTGGAGAACCGCGCCTGCGGGATCGGCCTGGCGGCCCGCCTCTCGGTCCCGGCTTCGGTGCTGATCCATGGTCCATAA
PROTEIN sequence
Length: 444
MRSLRREALLWLSGLLGVLGVASAASSYYLVQDETNSFLDSQLRQIAYYVDDTPSVPVRPTPDDPLYEPEDDFLVQIWDVAGRSILASDPGVPIVRRTTTGFSNETTPSETWRTFTYVTPQRTVQISQRLSVREELARDSALRSALPVVVLIPLSWLLLGFVIDRVMRRLDRLAAVVGAREADSREPIPLRDVPREVVPLVRAMNDLLDRLGRALERQRRFVSDAAHELRTPLAALQLQIGNVRGVAKGRDLLSRLADLEAGARRASNLVAQLLRLARYDADHRPAPADVLDLTALVEDCVREIAPVAAAAGLAVAIKAGTALRLRGVASELRILIANLLDNAVRYTPRGGTIEIEAGIGADGNGLVEIRDSGPGIPEQLRDRVFERFFRASAPTIEGSGLGLAIARSIAEHHGIAIVLENRACGIGLAARLSVPASVLIHGP*