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berkeley_reactor_200306_biofilm_scaffold_24673_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(22775..23443)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family Environmental Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5T8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 219.0
  • Bit_score: 320
  • Evalue 7.20e-85
Two component transcriptional regulator, winged helix family Environmental Information Processing {ECO:0000313|EMBL:ENN88521.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 219.0
  • Bit_score: 320
  • Evalue 1.00e-84
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 219.0
  • Bit_score: 319
  • Evalue 5.90e-85

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGGGTTCTCCTGATCGAAGACGATCCGATGGTGGGCAAGGCCCTGGCGCAGGCGTTGCGCGACGAAGGCATGGCGGTCGACTGGGTGCGCGACGGCCACGATGCGGAAGCGGCGCTGCGCAATCCCGGCCATGTCCTGGTGCTGCTCGACCTCGGCCTGCCCGGCAAGAGCGGCATCGCGCTGCTCCGGGCGCTGCGGGCGCGGGGAGATGCCACGCCGGTGCTGATCATCACCGCGCGCGACGATCTCGACGACCGGGTGGAGGGCCTCGATCTCGGCGCCGACGACTACGTGGTCAAGCCCTTCGAGATCCGCGAGCTCATGGCGCGGATGCGCGCGGTGCTGCGCCGCCGCCATGGCGGACAGGCGGTCTCGGCGCTGGTCTGCGGAGAGCTGGTCCTCGACCTGGAGACCCACCGGGTCAGCTATCGCGAGGCGGCCCATGTCCTGCCGGCACGGGAGTTCGCGCTGATGCGCGCCCTCAGCGAGCGTCCCGGCGCCATCCTGTCGCGGGCGCAACTGGAGGAGCGGCTCTACGGCTGGGGCGAGGAGGTCGAGAGCAACGCCGTCGACGTGCTGATCCACTATGTCCGTCGCAAGTTCGGCAAGGACGTCATCCGCAACGTGCGCGGCGCGGGCTGGATGATCGCCAAGGGATCGTCATGA
PROTEIN sequence
Length: 223
MRVLLIEDDPMVGKALAQALRDEGMAVDWVRDGHDAEAALRNPGHVLVLLDLGLPGKSGIALLRALRARGDATPVLIITARDDLDDRVEGLDLGADDYVVKPFEIRELMARMRAVLRRRHGGQAVSALVCGELVLDLETHRVSYREAAHVLPAREFALMRALSERPGAILSRAQLEERLYGWGEEVESNAVDVLIHYVRRKFGKDVIRNVRGAGWMIAKGSS*