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berkeley_reactor_200306_biofilm_scaffold_24673_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 24401..25948

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate binding protein (Oligopeptide) n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PSD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 517.0
  • Bit_score: 655
  • Evalue 2.90e-185
ABC transporter, substrate binding protein (Oligopeptide) {ECO:0000313|EMBL:CCM76738.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 517.0
  • Bit_score: 655
  • Evalue 4.00e-185
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 513.0
  • Bit_score: 643
  • Evalue 3.20e-182

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGACGATCTCAGCGCCCACCCGCCGTGGCTTTCTCGCCGGGGCCGCCTCCGCCGGCCTCGCCGTCGCCGTGGGCGGCCCGGCCCGCGCCGCGGACACGCCGCAGCGCGGCGGCCATTTCCGCCTGGGTGCCAACGGCGCCGGCATCGGCGATTCCCTCGATCCCGCCACCTATACCGGCGGCACGGTAGCGCTCGCCATGCTGGCGGTGTGCAACAACCTCACCGAGATCGACGCCGCCGGCAAGCTGCAGCCCGAGCTCGCCGAGAGCTGGGAGGCGACGCCCGACGCCAAGGTGTGGACCTTCAGGCTGCGCAAGGGCGTGAAGTTCCACGACGGCCGCGACCTCACCGCCAGGGACGTGGTGGCGAGCTTCAACCACCATCGCGGCGAGACCAAGTCGGCCGCCCGCGCCGTCCTGGCGCCGGTCAGCGACGTCAAGGCCGGCGACGACCACACCGTCATCTTCACCCTCGCGTCCGGCAATGCCGACCTGCCCTATCTGATGACGGATTATCATTTCGTCGTCATGCCGGCCAAGACCGACGGCACGCTCGACTGGGAGAAGGCCATCGGCACCGGCGGCTACAAGCTCGATCGCTTCGAGCCGGGCGTGCGCATCGCCATGACGCGCTTCGACGGCTATTTCAAAACCGATCGCGCCTGGTTCGAGTCGGCCGAGATCCTGGCCATCGCCGACGCCACCGCTCGGCAGAACGCCCTGATCGGCGGCCAGATCGACGCCATGAACGGCGTCGATCCCAGGACCGCCAACCTGCTCAAGCGCGTCAGCACCCTCCGGCTGGAGAACGTGGTCGGCACCTCGCACTACACCCTGCCGATGTTCTGCGACGCCGACCCCTATAGGAATCTCGACGTGCGCCTCGCCCTGAAATACGCCATCGACCGCGAGGCGCTGGTCGCCAAGGTGCTGGGCGGCTTCGGCCAGGTCGGCAACGACCACCCGATCGCGCCGGCCAACCGCTACTATGCGGCCGACCTGGAGCAGCGCGCCTATGATCCGGAGAAGGCCAGGTTCCACCTGAGGAAGGCGGGGCTCGACGGGCTCAAGGTGCAGCTCAGCGCCTCCAACGCCGCCTTCTCCGGCGGCCTCGACACCGCGGTGCTGTACCAGGAGGCCGCCGCCCGGGCCGGCATCGAGATCACCGTCAAGCAGGAGGCCGACGATGGCTACTGGAGCGACGTCTGGCTGAAGAAGCCCTTCGTCGAGAGCTACTGGAACGGCCGGCCGACCGAGGACGACATGTTCTCCCTGGTCTATGCCAAGGGCGGCCCCTGGAACGACGCCCATTGGGACAATGAGCGCTTCAACGCGCTGCTGCTGGAGGCGCGGCCGCTGCTCGACGAGGCCCGGCGCCGCGAGATCTATCGCGAGATGCAGCAGCTCGTGCGCGATGACGGCGGCACCATCATCCCGATGTTCGCCAACTATGTCGACGCCACCTCGACCCGCATCGCCCACGGGCCGCTGTCGAACCATCGCTATCTCGACGGCTGGAAATGCATCGAGCGCTGGTGGACGGCCTGA
PROTEIN sequence
Length: 516
MTISAPTRRGFLAGAASAGLAVAVGGPARAADTPQRGGHFRLGANGAGIGDSLDPATYTGGTVALAMLAVCNNLTEIDAAGKLQPELAESWEATPDAKVWTFRLRKGVKFHDGRDLTARDVVASFNHHRGETKSAARAVLAPVSDVKAGDDHTVIFTLASGNADLPYLMTDYHFVVMPAKTDGTLDWEKAIGTGGYKLDRFEPGVRIAMTRFDGYFKTDRAWFESAEILAIADATARQNALIGGQIDAMNGVDPRTANLLKRVSTLRLENVVGTSHYTLPMFCDADPYRNLDVRLALKYAIDREALVAKVLGGFGQVGNDHPIAPANRYYAADLEQRAYDPEKARFHLRKAGLDGLKVQLSASNAAFSGGLDTAVLYQEAAARAGIEITVKQEADDGYWSDVWLKKPFVESYWNGRPTEDDMFSLVYAKGGPWNDAHWDNERFNALLLEARPLLDEARRREIYREMQQLVRDDGGTIIPMFANYVDATSTRIAHGPLSNHRYLDGWKCIERWWTA*