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berkeley_reactor_200306_biofilm_scaffold_28919_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1853..2926)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE654E related cluster n=1 Tax=unknown RepID=UPI0003CE654E similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 354.0
  • Bit_score: 491
  • Evalue 5.00e-136
Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter {ECO:0000313|EMBL:CDX15552.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 354.0
  • Bit_score: 498
  • Evalue 7.40e-138
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 354.0
  • Bit_score: 489
  • Evalue 5.30e-136

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
GTGGCGGCTGATCCGGTCCTGCGGCTGGAAGCCGTCTCCAAGCGCTTTCCCGGCGGCGTGGTCGGCCTCGACGAGGTCGACCTCACCATTGCCACGGGCGAGTTCCTCAGCCTGCTCGGCCCCTCCGGCTGCGGCAAGACCACCACGCTCAGGGTCATCGCCGGCTTCGAGCAGCCGACCGGGGGCCGGGTCCTGCTCGACGGCCGCGACGTCACGGCGCTGCGGCCCTATGACCGGCCGGTCAACACCGTGTTCCAGGACTATGCCCTGTTCCCGCACATGGACGTCGCCGAGAATGTCGGCTTCGGCCTGACGCTGCGACGGCTCCCCGCCGCCGACATGCGGCGCCGGATCGCGGCGGCGCTGGAGCTGGTCGGCCTCGCCGACAAGATCGGCGCGCGGGTCGCCGCCCTCTCCGGCGGCCAGCGCCAGCGCGTCGCCCTCGCCCGGGCGATCGTGTGCGAGCCCCGGGTGCTGCTGCTCGACGAGCCGCTCTCGGCGCTCGACGCGCATCTGCGCGAGCAGATGCAGGTTGAGCTCAAGCGCCTGCAGGCCGAGCTCGGCACCACCTTCGTCATGGTGACGCACGACCAGACCGAGGCCTTGTCCATCTCCGACCGCATCGCGGTGATGAACCGCGGCCGCATCGAGCAGATCGCCGGCCCGGCCGAGCTCTACGATGCGCCCGCCACCCGCTTCGTCGCCGGCTTCATCGGCACCATGAACGTGCTGGAGGGCCGGGTGGTCGAGCGCCGCGGCGACGGCCTCCTCGTCGCCGCCGGCCCGCTCATGCTGGAAGCGCAGGGCGAGGGTCCGGGGCCGGGCGAGCCGCTCGCCGTCGGCATCCGCCCGGAGGACGTGCTGATCGAGGCCGAGGCGCCCGATACGGCTGCCGCGCGCCTCGTCGGCACCGTGTTCCATGGCCGTTCCCTGCGCCTCCACGCCCGGCTCGCCGACGGGACCGAGCTCACCATCGACACGCCGCGGCGCGCCGCCTCCGCCGGCTTCGCGGTCGGCGACACGCTTTTTCTTAGCGTCCGGCCGGGCGCGGCGCGTACATTGCGCGCGGCCTGA
PROTEIN sequence
Length: 358
VAADPVLRLEAVSKRFPGGVVGLDEVDLTIATGEFLSLLGPSGCGKTTTLRVIAGFEQPTGGRVLLDGRDVTALRPYDRPVNTVFQDYALFPHMDVAENVGFGLTLRRLPAADMRRRIAAALELVGLADKIGARVAALSGGQRQRVALARAIVCEPRVLLLDEPLSALDAHLREQMQVELKRLQAELGTTFVMVTHDQTEALSISDRIAVMNRGRIEQIAGPAELYDAPATRFVAGFIGTMNVLEGRVVERRGDGLLVAAGPLMLEAQGEGPGPGEPLAVGIRPEDVLIEAEAPDTAAARLVGTVFHGRSLRLHARLADGTELTIDTPRRAASAGFAVGDTLFLSVRPGAARTLRAA*