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berkeley_reactor_200306_biofilm_scaffold_28919_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2916..3530)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HV60_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 202.0
  • Bit_score: 277
  • Evalue 8.40e-72
XRE family transcriptional regulator {ECO:0000313|EMBL:ESZ34906.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 202.0
  • Bit_score: 277
  • Evalue 1.20e-71
cupin similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 202.0
  • Bit_score: 274
  • Evalue 2.00e-71

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Taxonomy

Mesorhizobium sp. L2C067A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGACGGTCGAACAGATCGACGAAGGCGACGCTTCCGACCATGCGGCGGCCGACATCCGCGTCGGGCGGCGCATCCGGGCGCTGCGGCTGGAGCGCCATCTCGGCCTCACCGAGCTCGCCCAGCGCGCCGGCATCTCGGTCGGCGCGCTCAGCCAGATCGAGCGCGGCCTGACCTCGCTGCGCGTGCGGGTGCTCTGGCCGCTCGCCGCCGCGCTCGACGTCGAGCCGCACAGCCTCATCTCCGAGGGTGGCGAGGAGGCAGGCGACCTCTACAGCGTGCGCGCCAATGGCCGCCGGCAGGTGCCGGTCTGGTCCGAGGGCATCCGCAAGGACCTCTTGTCGCCGCCGGGCGCGGCCCTGACCGGGCTGATGGTCCGGGTGGAGCCGGGCTGCGGAGCCGCGGCGGCCTATGCCCATGCCGGGCACGAGTTCGGCATCGTCGAGGCCGGCGAGCTGGAGCTGACCATCGACGGCGTCGTCTACCTCCTCAAGGCCGGCGACAGCTTCGCCTTCAAGAGCACGCTCTCCCACACGTTCCGCAATCCCGGCCGCGAGCCCTGCACGGTGCTGTGGGTCAACACGGTCAAGCCCTCCGAGGTGCGCGGTGGCGGCTGA
PROTEIN sequence
Length: 205
VTVEQIDEGDASDHAAADIRVGRRIRALRLERHLGLTELAQRAGISVGALSQIERGLTSLRVRVLWPLAAALDVEPHSLISEGGEEAGDLYSVRANGRRQVPVWSEGIRKDLLSPPGAALTGLMVRVEPGCGAAAAYAHAGHEFGIVEAGELELTIDGVVYLLKAGDSFAFKSTLSHTFRNPGREPCTVLWVNTVKPSEVRGGG*