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berkeley_reactor_200306_biofilm_scaffold_28919_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4944..5786)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J799_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 263.0
  • Bit_score: 365
  • Evalue 4.20e-98
potI; Spermidine/putrescine ABC transporter similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 263.0
  • Bit_score: 365
  • Evalue 1.20e-98
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:CCB67209.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 263.0
  • Bit_score: 365
  • Evalue 5.90e-98

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGAGCGCGCCCGACGCCGCCCCGGGCGGGCGCTGGCTCGCCGCCTATGTCGGGGCCTACCTCGTCTTTCTCTACCTGCCGATCGTGCTGATCCCGCTGTTCTCGTTCAACGATTCGATCCAGGCCGCCTTCCCCCTGAAGGGCTTCACCCTCGCCTGGTACGCCGGCCTCTTCGCCAACGAGGAGCTGCACCGCGCGCTCTTCACCAGCCTCGTCGTCGGCCTCTGCGCGGCGGCGCTGGCGACGCTGACCGGCGTCACCGTCGCCTATATGGACGTGGTCGGCGGCGGGCGGACGGCGCGGCTGGTCTCGGCGCTGGCGCGCCTGCCGATCCTGATCCCCGGCGTCATCGTCGGCATCGCCCTGCTGATCCTGGCCAACCTCGCCGGGCTCGGGCCATCACGCGCCGCCATCGTGCTCGGCCACACGCTGGTGGCGCTGCCGACCACGGTGGTCATCATGCGCAGCCGGCTCAAAGCCCTGCCCAGGAGCCTCGGCGAGGCGGCGATGGATCTCGGCGCGCATGAGGCGACGGTGTTCCGGCGCGTGCTGCTGCCGCTCGCCGCGCCGGCGGTGGCCTCGGCCTTCCTGCTCGCCTTCCTCACCTCGTTCGACGAGTTCATCGTCGCCTTCTTCCTCGCCGGCACCGACGCGACGCTGCCGGTGTTCATCTGGAGCCAGCTGCGCTTTCCCAAGGCCCTGCCCGGCGTGATGGCGCTCGGCACCCTCATCCTCGCCGTTTCGGTCGCCGTCGCCACCGGCGCCGAGCTGATCCGCCGCCGCGGCCTGCGCGGCGCCGGTCCCGTCCCGGCCGCCGCGGCCGGGGCGGCGCTGCAAGCCTGA
PROTEIN sequence
Length: 281
MSAPDAAPGGRWLAAYVGAYLVFLYLPIVLIPLFSFNDSIQAAFPLKGFTLAWYAGLFANEELHRALFTSLVVGLCAAALATLTGVTVAYMDVVGGGRTARLVSALARLPILIPGVIVGIALLILANLAGLGPSRAAIVLGHTLVALPTTVVIMRSRLKALPRSLGEAAMDLGAHEATVFRRVLLPLAAPAVASAFLLAFLTSFDEFIVAFFLAGTDATLPVFIWSQLRFPKALPGVMALGTLILAVSVAVATGAELIRRRGLRGAGPVPAAAAGAALQA*