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berkeley_reactor_200306_biofilm_scaffold_28919_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(5783..6673)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEBCBA related cluster n=1 Tax=unknown RepID=UPI0003CEBCBA similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 295.0
  • Bit_score: 448
  • Evalue 3.10e-123
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:ESY73245.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 295.0
  • Bit_score: 448
  • Evalue 4.30e-123
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 295.0
  • Bit_score: 444
  • Evalue 1.20e-122

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGACCGCAGCGGCCCTTCCCTCCCCGAACGCGACCTCCGAGCACCGGCGCCGGCTGTTCGGCGCGGCGATGATGCTGCCGGGAGCGCTGGCGAGCCTGGTGCTGGTGCTGTTCGCGCTCGGGGCCGTGCTGGCGCTGGGCTTTCGCCGCAACGACGGCACGCTCGCCGGCGCCGGCTTCACCCTCGACAATTTCGCCGCCGCGCTCGGCGACCCGCTCTATGGCGCGGTGCTGCTGCGCTCGCTGGCCATCGCCGGCCTGGTGACGCTCGCGACGGTCGCGACTGCCTATCCCGTCAGCTATTACATCGCCTTCCATGCCGGGCGCCGCCGCGGCCTCATCCTGTTCCTGGTGACGCTGCCGTTCTGGACCAGCTATCTCCTGCGGGTGTTCGCCTGGAAGATCGTGCTCGCCTTCAACGGCGTGCTCAACTCGGCGCTGCTGACCAGCGGGCTGACCGCCGAGCCGATTCTCGCCTTCCTCAACACCCCGGCCGCGGTGGTGGTGACGCTGGCGCATGCCTATGCCGCCTTCGCCATCCTGCCGATCTACGTGGCGCTCGACACCATCCCGCGCTCGCTGCTCGAGGCGGCCGGCGACCTCGGCGCCCGGCCCTTCACCACCTTCCGCCGCGTGGTGCTGCCGCATTCGCTGCCCGGCGTGCTCTCGGCGGCGCTGGTGGTGTTCGTGCCGACGGTCGGCGACTATGTCACGCCGGCGCTGGTCGGCGGGCCGGCCAGCACCATGATCGGCTCGATCATCCAGGCCCAGTTCGGCAAGGCCGACGACTGGCCGTTCGGCGCCGCCCTTTCCGTCCTGGTCATGCTGGTCATCCTCGCCGTGGTGCTGGCCGCCCGGGCCGGCGACCGGCGCTGGGGGAGCCGGACATGA
PROTEIN sequence
Length: 297
MTAAALPSPNATSEHRRRLFGAAMMLPGALASLVLVLFALGAVLALGFRRNDGTLAGAGFTLDNFAAALGDPLYGAVLLRSLAIAGLVTLATVATAYPVSYYIAFHAGRRRGLILFLVTLPFWTSYLLRVFAWKIVLAFNGVLNSALLTSGLTAEPILAFLNTPAAVVVTLAHAYAAFAILPIYVALDTIPRSLLEAAGDLGARPFTTFRRVVLPHSLPGVLSAALVVFVPTVGDYVTPALVGGPASTMIGSIIQAQFGKADDWPFGAALSVLVMLVILAVVLAARAGDRRWGSRT*