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berkeley_reactor_200306_biofilm_scaffold_28919_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8220..9935)

Top 3 Functional Annotations

Value Algorithm Source
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KJB94720.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KJB94720.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 567.0
  • Bit_score: 963
  • Evalue 1.30e-277
putative dihydroxy-acid dehydratase (EC:4.2.1.9) similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 568.0
  • Bit_score: 825
  • Evalue 8.60e-237
L-arabonate dehydratase AraC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EHN7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 565.0
  • Bit_score: 890
  • Evalue 5.90e-256

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGAGCCAGGACGACAAGCCGCACGGCCTCAGGCGCGGCCTCACCAATTACGGCGACCGCGGCTTCAGCCTCTATCTCCGCCGCTCCTTCGCCAGCTCCATGGGCTATTCCAGGCAGATGCTGGAGCGGCCGATCGTCGGCATCTGCCATTCCGCCAGCGGCTTCAACAATTGCCACCGCCATTTCCCCGAGCTGATCGAGGCGGTGAAGCGCGGCGTGCTCGCCGCCGGCGCCCTGCCGGTGGAGTTCCCCACCATCTCGCTCGGCGAGGTCTTCCTCGAGCCGACCAGCCTGAAGTTCCGCAACCTGATGGCCATGGATGTGGAGGAGATGGTCCGCGCCCAGCCGATGGACGCGGTGGTGCTGCTCGGCGGCTGCGACAAGACCGTGCCGGCCCAGCTGATGGGCGCGGCCTCGGCCGACCTGCCGGCGATCCAGCTCGTCGCCGGGCCGATGTCGACCAGCCGCCACCGCGGCGAGCGGCTCGGCGCCTGCACGGACTGCCGGCGCTTCTGGGCGCGCTACCGCGCCGGCGAGGTGGACGACGAACAGATCGACGCGGTGGAGCAGCGCCTCGCCTCGACATCAGGCACCTGCGCCGTGATGGGCACGGCCAGCACCATGGCGAGCCTCGCCGAGGCGCTCGGCATGATGCCGGCCGGCGCCGCCGCCATCCCCGCCGTCGACGCCGACCGGCTGCGCATGGCGGAGGAGACGGGCCGCATCGCCGTGTCGCTGATCGGCTCGGACCGGCGCCCGAGCCGGATCATGACGGCCAAGGCCTTCGAGAACGCGGTGCGCGTGCTGCTGGCGCTCGGCGGCTCGACCAATGCCGTGGTGCATCTCGCCGCCATCGCCGGCCGGCTCGGCCACCGCCTCGACCTCGACGCGATGAACGCCATGAGCGAGACCACGCCGGTGCTGGTCGACCTCAAGCCCACCGGCAGCGCCTATATGGAGGACCTCTACGCCGCCGGCGGCATCCCCGCCGTGCTGCGCGAATTGCGCCCGCTGCTGCATCTCGACTGCCTGACCGTGACCGGCGAGACCCTCGGCGAGCGTATCGACGCCGCGCCCGCCTGGGTGGACCGCGCCGTGGTGCACGCAGCCGTCGCGCCGGTCCGGCCGACCGGCGGGCTCGTCGCCCTGTTCGGCAACCTCGCCCCGCGCGGCGCCATCCTGAAGCGCGCCGCCGCCGACCCCGCCTTGTTCGAGCGCGAGGGCCGCGCCGTGGTGTTCACCTCGCTCGCCGACCTCGCCGCCCGCATCGACGACCCCGCCCTCGACGTGACGCCCGAGGATTTCCTGGTGCTGCAGAATGCCGGGCCGACCAGCGAGGCCGCCATGCCCGAGGCCGGCTACCTCCCGATCCCCGCCAAGCTCGCCCGCGCCGGCGTCAAGGACATGGTGCGCATCTCCGATGCGCGCATGAGCGGCACCGCCTACGGCACCATCGTGCTGCACGTCGCCCCCGACGCCGCCTCCGGCGGCCCGCTCGCCCTGGTGCGCGACGGCGACCGCATCCGCCTCAGCGTGGCGGAGCGGCGGCTGGAACTGCTGGTCGACGATGAGGAGCTCGCCGCGCGGCGCGAGGGCCTGCCGCCCCGTGCGCGCAAGCCGACACGGGGGTATCAGCGGCTGTACGAGGAGCAGATTTTGCAGGCGGACGAGGGGTGCGACTTCGGGTTTCTGAGGGGGCTGAAGGTGGAGGGCTGA
PROTEIN sequence
Length: 572
MSQDDKPHGLRRGLTNYGDRGFSLYLRRSFASSMGYSRQMLERPIVGICHSASGFNNCHRHFPELIEAVKRGVLAAGALPVEFPTISLGEVFLEPTSLKFRNLMAMDVEEMVRAQPMDAVVLLGGCDKTVPAQLMGAASADLPAIQLVAGPMSTSRHRGERLGACTDCRRFWARYRAGEVDDEQIDAVEQRLASTSGTCAVMGTASTMASLAEALGMMPAGAAAIPAVDADRLRMAEETGRIAVSLIGSDRRPSRIMTAKAFENAVRVLLALGGSTNAVVHLAAIAGRLGHRLDLDAMNAMSETTPVLVDLKPTGSAYMEDLYAAGGIPAVLRELRPLLHLDCLTVTGETLGERIDAAPAWVDRAVVHAAVAPVRPTGGLVALFGNLAPRGAILKRAAADPALFEREGRAVVFTSLADLAARIDDPALDVTPEDFLVLQNAGPTSEAAMPEAGYLPIPAKLARAGVKDMVRISDARMSGTAYGTIVLHVAPDAASGGPLALVRDGDRIRLSVAERRLELLVDDEELAARREGLPPRARKPTRGYQRLYEEQILQADEGCDFGFLRGLKVEG*