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berkeley_reactor_200306_biofilm_scaffold_28919_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15628..16563

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter protein n=1 Tax=Mycobacterium leprae (strain Br4923) RepID=B8ZUE4_MYCLB similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 301.0
  • Bit_score: 260
  • Evalue 1.60e-66
transporter protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 301.0
  • Bit_score: 260
  • Evalue 4.60e-67
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDR04533.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 304.0
  • Bit_score: 260
  • Evalue 3.00e-66

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Taxonomy

Streptomyces iranensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCTTTCCCAATCGGCAGGTGAGTTCCTGTCGCGATACATCGCCTATGTCGCGCTGGTCGTGGTCGTCGCCGTGTTCGGCGTCCTGGCGCCCGACCGCTTCCTGACCACGGGCAATCTCGGCATCGTGCTGCAGAACTGCGCGGTGCTGTGCGTCGTCGCCATCGGCATCACCTTCATCATCATCGGCGGCAGCATCGACCTCAGCGTCGGCTCGGTGATGGCGCTTTCCGGCGCCGTCGCCGCCAGCTGTATCGGCTCGCTCGGCGCCTGGGCCTTCCTGGTCGCCCCGCTGGTCGGCGCCGGGCTCGGGGCGGTCAATGGCGCCGTGTTCGTCTTCGGCCGCATCCCCTCCTTCGTCGTCACGCTCGGCATGCTGTCGGTCGCCCGCGGCTCGACCGTCATCTTCACCGGCGGCATGCCGGTGCCGATCCCCCTAACCAGCGACTTCTACGTCTACGGCACTCCGCCGATGCCCTTCGCCATCGCCGTCGGCGTCGCGGTGGTGATGGGCGCGCTGCTTCGATTCACCACCTTCGGGCGCTATACCTTCGCCATCGGGGGCGATGAGGAGAAGACGCGCGTGCTGGGCGTGCCCGTCGACGGCGTGAAGCTCGCCATGTTCGTCGTCTCCGGCATGCTGGCCGGCCTGGGCGGCGGCATCCTCACCTCCCAGCTCGGCTCGGGCAGCCCGACCGTCGGCACCGGCTTCGAGCTGATGGCCATCTCCGCCGTCGTCATCGGCGGCACGCCGCTCACCGGCGGCGCCGGCTCCGTCCTCGGCACGGTGGTCGGCAGCCTCGTCATCACCACGCTCGCCAACGGGCTGATCATCATGGGCGTCGCCACCAACGTCCAGACCGTGCTGACCGGCATCGTCCTGGTCGGCGCGGTGATGATTTCGATCCGCCGCGGCAAGCTGAAAATCATCAAGTAG
PROTEIN sequence
Length: 312
MLSQSAGEFLSRYIAYVALVVVVAVFGVLAPDRFLTTGNLGIVLQNCAVLCVVAIGITFIIIGGSIDLSVGSVMALSGAVAASCIGSLGAWAFLVAPLVGAGLGAVNGAVFVFGRIPSFVVTLGMLSVARGSTVIFTGGMPVPIPLTSDFYVYGTPPMPFAIAVGVAVVMGALLRFTTFGRYTFAIGGDEEKTRVLGVPVDGVKLAMFVVSGMLAGLGGGILTSQLGSGSPTVGTGFELMAISAVVIGGTPLTGGAGSVLGTVVGSLVITTLANGLIIMGVATNVQTVLTGIVLVGAVMISIRRGKLKIIK*