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berkeley_reactor_200306_biofilm_scaffold_28919_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23831..24817)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ21_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 311.0
  • Bit_score: 543
  • Evalue 1.30e-151
NMT1/THI5 like domain protein {ECO:0000313|EMBL:CDX46644.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 319.0
  • Bit_score: 552
  • Evalue 3.10e-154
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 311.0
  • Bit_score: 543
  • Evalue 3.70e-152

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGATCAAGCATCTGCTCCGCAAATCGATGACGACGGCGGCCCTGCTCGCGCTCGGCCTCGGCCTTTCCGGCGCCGCCGAGGCCGGCACCATCCGCCTCGGCATGACCACCTGGGTCGGCTACGGCCCGCTGTTCCTGGCGCGCGACCTCGGCTACTTCAAGGAGGCGGGGCTCAACGTCGACCTGAAAATCATCGAGGAATCCTCGCTCTACATGGCGGCGGTCGCCGGCGGCGACCTCGACGGCGCGGCCTCCACGGTCGACGAGCTGATGAAATACCGCTCGTCCGACCTGTGCTTCAAATATGTCCTGGCGCTCGATGACAGCCATGGCGGCGACGGCGTCATCACCCAGGCGGACGTCACCTCGCTGAAGGACCTCAAGGGCAAGGCCGTCGCCTTCAACGAGGGCTCGGTCTCCGAGTTCTGGTTCAACGTGCTCCTGAAGAAGGAGGGCATGACGGAAGACGACGTCACCGTCACCAACATGACGGCGGACGATGCCGCCGCCGCCTTCATCGCCGGCCGCGTCCCCGCCGCCGTGACCTGGGAGCCGCACCTCACCGAGGTGCGCAAGCAGGGCAAGGGCAAGGTGCTGGTCGATTCCGCCTCGACCCCCGGCCTGATCGTCGACGTGGTGGCGCTGAAATGCGACGTGATCGACAAGCACCCCGACGACGTCAAGGCGCTGATCAAGGGCTATTACAAGGCCGTCGACTACATCAAGACCAACCCCGACAAGGCCTATGAAATCATGGCCAAGGGCGTGGGCGGCTATCTGGAGAAGCCGGCCGACTTCGCCGACGCCGCCAAGGGCGTCAACTATTACGGCCGCGAGCGCAACGCCGAGTTCTTCGGCACGCCCGAGAAGAGCGAGGCGGCGGACCTGGTCAAGTTCGCCCAGGACATCTGGGGCAAGGCCGGCAAGCTGAAGATGCCGATCGACACCGCGACGATCCTCGACACGCGCTTCATCAAGAGCGAGTGA
PROTEIN sequence
Length: 329
MIKHLLRKSMTTAALLALGLGLSGAAEAGTIRLGMTTWVGYGPLFLARDLGYFKEAGLNVDLKIIEESSLYMAAVAGGDLDGAASTVDELMKYRSSDLCFKYVLALDDSHGGDGVITQADVTSLKDLKGKAVAFNEGSVSEFWFNVLLKKEGMTEDDVTVTNMTADDAAAAFIAGRVPAAVTWEPHLTEVRKQGKGKVLVDSASTPGLIVDVVALKCDVIDKHPDDVKALIKGYYKAVDYIKTNPDKAYEIMAKGVGGYLEKPADFADAAKGVNYYGRERNAEFFGTPEKSEAADLVKFAQDIWGKAGKLKMPIDTATILDTRFIKSE*