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berkeley_reactor_200306_biofilm_scaffold_28991_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3..509)

Top 3 Functional Annotations

Value Algorithm Source
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 163
  • Evalue 2.10e-37
Cobalamin synthase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WYR8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 163
  • Evalue 1.50e-37
cobalamin-5-phosphate synthase CobS similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 163.0
  • Bit_score: 160
  • Evalue 3.50e-37

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Taxonomy

Methylobacterium sp. GXF4 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGTCCGACTATCCCGCTTCCGTCGCCCGGGCGCTGCGCTTCTGGTCGCGGCTGCCGCTGCCGGTGCTGCCCTTCGAGATCGACCCGCACGCGCCGCCGGTCATGACGGTGCTGGCGCCGGCCGCGCCCGCCGCCGGCGCTCTGATCGGCCTCCTCGGAGCCCTGGTGCTGGCGCTGGCGCACGGGCTCGGGCTCCCCGCCTGGCCGGCGGCGAGCGCCGCCGGCGCCGCCCTGGTCCTCGCCACCGGCGCCCTGCACGAGGACGCGCTGGCCGACGTCGCCGACGGCTTCGGCGGTGGCGGCACCATCGTCCGCAAGCTGGAGATCATGAAGGACCCGCGGCTCGGCAGCTACGGCGCCGCGGCCCTTTCGCTGGCCCTGCTGGCCAAGGTGGCGCTGCTCGGCGAGCTCCTGGCCCGGCACGGACCCTGGCGGGCCGCCGCCGCGCTCGTCGCCGCCGCGGCCATGGCGCGCATCGCCGGGCTGTGGCCGCTGGTGGCGCTGCCG
PROTEIN sequence
Length: 169
VSDYPASVARALRFWSRLPLPVLPFEIDPHAPPVMTVLAPAAPAAGALIGLLGALVLALAHGLGLPAWPAASAAGAALVLATGALHEDALADVADGFGGGGTIVRKLEIMKDPRLGSYGAAALSLALLAKVALLGELLARHGPWRAAAALVAAAAMARIAGLWPLVALP