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berkeley_reactor_200306_biofilm_scaffold_28991_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10354..11547)

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase/muconate lactonizing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4R7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 395.0
  • Bit_score: 633
  • Evalue 9.00e-179
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EHS52288.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 395.0
  • Bit_score: 633
  • Evalue 1.30e-178
mandelate racemase / muconate lactonizing enzyme family protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 395.0
  • Bit_score: 632
  • Evalue 7.40e-179

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGAAGATCACCGCCCTCGAGACCATCCGCCTCCAGGAGTTCGCCAATCTCCTCTGGCTGAAGGTGCACACGGACGAGGGCCTGACCGGGCTCGGCGAGACCTTCTTCATGCCGGCCACGGTGGAAGCCTATGTGCACGAGGTGCTCGCCCCCAAGGTCATCGGCCGGGATCCGCTCGCCATCGACCGGCTCGCCCGCGACGTGACCGGCTATCTCGGCTTCCGCTCGACCGGCGTCGAGGCCCGCGGCAATTCCGCCTTCGACATCGCCCTGTGGGACCTGTTCGGCCGGGCGACCGGCCAGCCGATCGCCCAATTGCTCGGCGGCTTCTCGCGCCGCAAGATCCGCACCTACAACACCTGCGCCGGCACCGCCTACATGCGCGAGGCCAGGGGCCAGAGCAGCGCCAACTGGGGCCTCGGCGGCAAGGAGCTCGACGACCTCGACGCCTTCCTCCACCGCGCCGACGAGCTGGCTGAGGATCTCCTCGCCGAGGGCATCACGGCGATGAAGATCTGGCCCTTCGACCTTGCCGCCGAAAAATCCGACGGCTGGTCGATCCCGGCGGCGGAGCTGAAGGCGGCGCTGGTGCCCTTCGAGAAGATCCGCGCCGCGGTCGGCGACCGGATCGACATCATGGTCGAGTTCCACTCGCTCTGGCAGCTGCTGCCGGCGATCGAGATCGCCAAGGCCCTGACGCCGCTCCGCACCTTCTGGCACGAGGATCCGATCCGGATGGATTCGCTCGGCGACCTCGCGCGCTATGCCGCGGTCTCGCCGGCGCCGATCTGCGCCTCGGAGACGCTCGGCAGCCGCTGGGCCTTCCGCGACCTGCTCGAGACCGGCGCGGCCGGGGTGGTGATGCTCGATATCGCCTGGTGCGGCGGCCTGTCCGAGGCCCGCAAGATCGCCGCCATGGCGGAGGCCTGGCACCTGCCGGTCGCCCCGCACGACTGCACCGGGCCGGTGGTGCTGTGCGCCTCGACCCATCTCTCGCTCAACGCGCCGAACGCCCTGATCCAGGAGAGCGTGCGCGCCTATTACCGCACCTGGTACCGCGATCTCGTCACCGCGGTGCCCCCGGTGGTGGACGGTGAGATCACCGTCCCGCCGGGCCCCGGGCTCGGGCTGGAGCTCGCGCCTGACATCACCAAGCGATTCACGGCGACGGTCCGCACCTCCAGGGGAGACTGA
PROTEIN sequence
Length: 398
MKITALETIRLQEFANLLWLKVHTDEGLTGLGETFFMPATVEAYVHEVLAPKVIGRDPLAIDRLARDVTGYLGFRSTGVEARGNSAFDIALWDLFGRATGQPIAQLLGGFSRRKIRTYNTCAGTAYMREARGQSSANWGLGGKELDDLDAFLHRADELAEDLLAEGITAMKIWPFDLAAEKSDGWSIPAAELKAALVPFEKIRAAVGDRIDIMVEFHSLWQLLPAIEIAKALTPLRTFWHEDPIRMDSLGDLARYAAVSPAPICASETLGSRWAFRDLLETGAAGVVMLDIAWCGGLSEARKIAAMAEAWHLPVAPHDCTGPVVLCASTHLSLNAPNALIQESVRAYYRTWYRDLVTAVPPVVDGEITVPPGPGLGLELAPDITKRFTATVRTSRGD*