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berkeley_reactor_200306_biofilm_scaffold_28991_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11558..12277)

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BX02_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 225.0
  • Bit_score: 281
  • Evalue 6.80e-73
Transcriptional regulator,GntR family similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 225.0
  • Bit_score: 281
  • Evalue 1.90e-73
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AAK64688.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 225.0
  • Bit_score: 281
  • Evalue 9.60e-73

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGGTCGCAGGCCCGCTCGAGACGGAGGCGCCGGAGGTCGGCCTGGTCGACCGGGTGATCGCCGCGGTCAAGGACCATATCCGCTCCAACGGCCTCGCCCCCGGCGACGTGCTGCCGAGCGAGAGCGCCCTGGCGCTGCAGATCGGCGTGTCGCGCGCCGTGGTGCGCGAGGCCTTCCGCTCCATGGTCGCCCTGCGGCTGATCGACATCGGCAACGGCCGCCGCGCCCGCGTCTCGAAGATCGACCCGAGCGTGCTGGCCAGCATGCTCGACCATGCCGTCCATACCGACCAGATCACCATCCAGCAGATCTACGACACCCGTCGGACCATCGAGCTTCGGACCGTGACGCTGGCGGCCATGCGACGCTCCGACCGCGAGGCGGCCGAGATCGCGGCGCTGGCGGCGGGGATGCGGCGGGATTTCTTCGAGGCGGAGGCGGTGATGGAGCACGACATCGCCTTCCACGAGGCGATCGGGCGCGCCTCGCGCAACCCGATGCTGAACCTGATCGTCGGCTCCTTCCACGTCGTCACCCGCCAGACCTGGGGCATCGGCTGGAAGAGCCGGACCAGCGACGGGCAGCGCATGGCCAGCGTCGAGTGCCACGAGGCGATCGCTCGGGCGATCACCGCGCGCGACCACGAGGCGGCGCAGGCCCTGATGGCCGAGCATTTCGACCTCTCGGTCAAGGCACTCCTCGCCGCCGGCATCAATTGA
PROTEIN sequence
Length: 240
VVAGPLETEAPEVGLVDRVIAAVKDHIRSNGLAPGDVLPSESALALQIGVSRAVVREAFRSMVALRLIDIGNGRRARVSKIDPSVLASMLDHAVHTDQITIQQIYDTRRTIELRTVTLAAMRRSDREAAEIAALAAGMRRDFFEAEAVMEHDIAFHEAIGRASRNPMLNLIVGSFHVVTRQTWGIGWKSRTSDGQRMASVECHEAIARAITARDHEAAQALMAEHFDLSVKALLAAGIN*