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berkeley_reactor_200306_biofilm_scaffold_28991_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18403..19911)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter substrate-binding protein n=1 Tax=Marinobacterium stanieri RepID=UPI00025592DE similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 494.0
  • Bit_score: 513
  • Evalue 1.70e-142
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC16272.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 489.0
  • Bit_score: 481
  • Evalue 1.00e-132
ABC transporter periplasmic solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 496.0
  • Bit_score: 473
  • Evalue 5.60e-131

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Taxonomy

Leisingera sp. ANG-Vp → Leisingera → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGCGCAGACGCATCTCGATCATGGTCAGGCTCCTTGCGGGGGCGATGATCGGCCTCTGCCTCCTGAACGGGGCGACCGCCGGCACGCTCCGGCTCGCCAATGAGGGCAGCTTTCGCGGGGCGGACTCGCTCGATCCGATTTCGCCGGTGCGCTTCTACATCGCCAACCAGATGATCTACAGCCAGCTGGTGCGCGCGGGAGAGGATGGCCGGCCCGCTCCGGATCTCGCGGTTGCCTGGTCTTCCTCCGCAGACGCGCGGGACTGGACCTTCACGCTCCGCCGGGGCGTCAAGTTCCACGACGGCAGCGATTTCGGCGCGGCCGACGTGGTCTATACGCTTACCCGGATCAACAGCGACAAGCTGAAGAGCCCGCTGCGGTCGGTCCTGTCGCTGATCGATACGGTCAAGGCCGTCGACCCCTATACGGTCGGCATCCACCTGAAGACGCCGTACGCCGATTTTCCGCTTCTCCTGATGGACTACCGCGTCCGGATCCTGTCGGCCGCGCACGACAGCGGCAACACCGACGTCGCCAACGCCTCCGGCATCGGCACCGGGCCCTTCAAGCTGGTGAAGCTCGACACGCTTGGCACCACGGTTCTCGAAGCCTTCGACGGCTATTGGGAAGGAAGGCCGAAGATCGACCGCGTCGAGATCATCAACATGCCCGATCAGCAGGCCCGCGTGCAGGCCCTGCTCGCCGGGCAGCTGGACCTCGTGCTGTCGATCAACCAGCAGCAGCGCGCGCTCTTCGAGGAAAGCGACGGCTTCGTCGTGCAGCCGGTGCAGACGGGCGACTGGCGCGGCATCGCCATGCGCACCAACGTGCCGCCCTTCGCCGATGCCCGGGTCCGCAAGGCTCTGCGCATCCTGGCCGATCGCAGCACGATGGTCCGCCTCGTGCTGGGCGAGGGCGGCGGCGAGGTCTCGTGCGACACGCCGGCGTGGTCCGGCGACCCCTACAGCACCGTACGCACATGCCCGCCCGACCCTGCCGAGGCCAAGCGGCTGCTCGCGGCGGCGGGCTTTCCGAACGGGCTCGATCTGACGCTGTACACGTCCGGCGTCGACGAGGTCTTTCCGCGATTGGCGGAGGTCTATCAGCAGCAGGCCGCTGCCGCCAACGTGCGCATCGCGATCCGGCTCGTGCCCTCGGACAGCTATTTTTCGACGGTCTGGCTGAAGCGGGAATTCGTCATGGTCCGTTGGTCGCAACGCCCAGCGGACCAGATCCTCAACGAGGCCTACCGGACGGGCGGACCCTGGAACGAGTCGGCTTTCGCCAATGCCCGGTTCGACGACGTCCTGACGGCTGCCCGCCAGGAGCTCGATCCGGCGAAGCGCAAGGCCCTCTATGGCGAGGCGCAGGATATTCTCTTCGACGACGGGGGCACGCTCATTCCGTTCCACATCAATCGCCTGCGGGTGATGAGCAACCGTGTGACCGGCCTTGCGCCGGTGCAGGACTTCTCCATCCGCTGGCAGGACGTCTCCGTTGCGAACTGA
PROTEIN sequence
Length: 503
MRRRISIMVRLLAGAMIGLCLLNGATAGTLRLANEGSFRGADSLDPISPVRFYIANQMIYSQLVRAGEDGRPAPDLAVAWSSSADARDWTFTLRRGVKFHDGSDFGAADVVYTLTRINSDKLKSPLRSVLSLIDTVKAVDPYTVGIHLKTPYADFPLLLMDYRVRILSAAHDSGNTDVANASGIGTGPFKLVKLDTLGTTVLEAFDGYWEGRPKIDRVEIINMPDQQARVQALLAGQLDLVLSINQQQRALFEESDGFVVQPVQTGDWRGIAMRTNVPPFADARVRKALRILADRSTMVRLVLGEGGGEVSCDTPAWSGDPYSTVRTCPPDPAEAKRLLAAAGFPNGLDLTLYTSGVDEVFPRLAEVYQQQAAAANVRIAIRLVPSDSYFSTVWLKREFVMVRWSQRPADQILNEAYRTGGPWNESAFANARFDDVLTAARQELDPAKRKALYGEAQDILFDDGGTLIPFHINRLRVMSNRVTGLAPVQDFSIRWQDVSVAN*