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berkeley_reactor_200306_biofilm_scaffold_28991_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(19967..20914)

Top 3 Functional Annotations

Value Algorithm Source
TauD/TfdA family dioxygenase (EC:1.14.11.17) similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 291.0
  • Bit_score: 147
  • Evalue 4.40e-33
hypothetical protein n=2 Tax=Rhizobium meliloti RepID=UPI000313847A similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 280.0
  • Bit_score: 201
  • Evalue 6.90e-49
Uncharacterized protein {ECO:0000313|EMBL:KDP87425.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.4
  • Coverage: 299.0
  • Bit_score: 160
  • Evalue 2.50e-36

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGATCTCGGTGCGTCCGGCTTCCGCCCACCTCGGCGCTGATGTGAGTGGCCTCTCCTTTGCAGAGATCGTCGATCGCGACGATCCGGACCTTTTTGCGCAGGTGAGCGCGGCGCTCGACCGTCATCTGGTGCTGCGGTTTCGCGACCAGCCCGTCGATCCCGAGCGCTTCGTGGCCTTCGCCCGTCATTTCGGCACCCTGGTCAATCTCAAGCGGGCCGAGAACGTCGATGCCCTCCATGTCGAGGAGCATCCGCTGATCAAGGTCATCTCCAACGCCTATGCCGCCGATGGACGCCCGCTCGGCGACGTCAACAACTCGTCGCAGCAGATCTGGCACAGCGACGGCTGCACGCAGCCCGCGCCGCCGGCCAAGACGTTCTTCTTCGGGCGCAAGGCGCCGGCCAATCCGCCCCGGACGATGTGGCTGCACATGGTCGAGGTCTTCCGGCGCATGCCCGAAGATCTGAAGGCGACGATCACGCCGCTGAGCGCGATCCATTCCGTCCACAACAATCCGAACGAGATCGCCCTGTTCCTGCGCCGCGGCTCGATCGGCATGGACAAGCTCCGCGAGGGGACACGCCACCCGCTCGTGTGCCGGCACCCTTCGACAGGAAAGCCGTTGCTCTATCTGCCCCGTCGTCGCGACACCCTTATCGTCGGCATGGATCTCGCCGAGAGCCGCGAGATCATGGACAGGCTCTGGGACTTCGTGCTGACGCAGACCTGCTGGTGGGGCGCGGGGATGGCGGAGAACGACCTCGTCATCTGGGACAATCTGGCGACGTTGCACGGGCGCGAAGGGTGGGAGAGCACCGAGGAGCGCGTCATGTGGCACGTCGCGACGACGGGCACGCCGCTCCTGGCCGCCTGCGGGGACGGCGACGGGGGCACGGTCGAGCGAGCGTCCGCGGAGCAGCATCTGTTGACGCCCTTGCTCGTCTAG
PROTEIN sequence
Length: 316
MISVRPASAHLGADVSGLSFAEIVDRDDPDLFAQVSAALDRHLVLRFRDQPVDPERFVAFARHFGTLVNLKRAENVDALHVEEHPLIKVISNAYAADGRPLGDVNNSSQQIWHSDGCTQPAPPAKTFFFGRKAPANPPRTMWLHMVEVFRRMPEDLKATITPLSAIHSVHNNPNEIALFLRRGSIGMDKLREGTRHPLVCRHPSTGKPLLYLPRRRDTLIVGMDLAESREIMDRLWDFVLTQTCWWGAGMAENDLVIWDNLATLHGREGWESTEERVMWHVATTGTPLLAACGDGDGGTVERASAEQHLLTPLLV*