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berkeley_reactor_200306_biofilm_scaffold_28991_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21303..22037

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6U7_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 229.0
  • Bit_score: 160
  • Evalue 1.80e-36
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 229.0
  • Bit_score: 160
  • Evalue 5.10e-37
Uncharacterized protein {ECO:0000313|EMBL:KJS33995.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 228.0
  • Bit_score: 160
  • Evalue 1.90e-36

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Taxonomy

Rhodospirillaceae bacterium BRH_c57 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGACGCAAAACGACGCGCACTTTCCCTGGCGCCGCGTTTACAGCACTCTCCAGACGCGCATCGTCCGTGGCGTGATGGCCCAGGGGCAGCAATTGCCGGCCGAAAACGACCTGGCCGATGAATTTCAGGTCCATCGCAACACGGTGCGGCGCGCCATCGAACGGCTGCGCGAGCAGGGCCTGATTCGCGTTCAGCACGGTGTCGGAAGCTTCGTTCGCGAACAAACCATCGTGCATTCGCTCGGGCCGCAGACGAAGCTGAGCGCCACGCTGCGGCGGATCAACCGGGTGGAGACCCGCCGGGTTCTGGACAGTGGACGCGTGCGCGCCGGCAGCGAAATCGGCCTGGCGCTGGGCGTGCCGGCCACCCGGTTCGTCCATCGGATCCGCATGCTGAACCTGATCGACGATCATGCGGCCATTCTGTCGAACATCTATTTCCCCTTGCCTCGCCTGGACGGCATCGGGGTGGCCCTGGAAGAGACCGGCTCGATCACGGAAGCGTTGCGCCGTTGCGGCGTGCCGAAGTTCACCCGGCGGGAGAGCCGCCTGTCGGCGGCGATGCTCTCGCAGCCCGATGCGGCCTTGCTGGAGCAGCCGCGCTCCGTGCCGGTTCTGTCCGTGCGGAATGTCAATGTCGATGAGGAAGGCCGGCCGGTTCAGTTCTCCCACTCTCTCGCGTCGTCCCGCTGGGTGGAGTTCGTCGTGCAGTTCGACGGCGTGCCCACCGGCTGA
PROTEIN sequence
Length: 245
MTQNDAHFPWRRVYSTLQTRIVRGVMAQGQQLPAENDLADEFQVHRNTVRRAIERLREQGLIRVQHGVGSFVREQTIVHSLGPQTKLSATLRRINRVETRRVLDSGRVRAGSEIGLALGVPATRFVHRIRMLNLIDDHAAILSNIYFPLPRLDGIGVALEETGSITEALRRCGVPKFTRRESRLSAAMLSQPDAALLEQPRSVPVLSVRNVNVDEEGRPVQFSHSLASSRWVEFVVQFDGVPTG*