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berkeley_reactor_200306_biofilm_scaffold_28991_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27870..28856)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=2 Tax=Streptomyces RepID=V4I9R4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 316.0
  • Bit_score: 82
  • Evalue 4.90e-13
Integral membrane protein {ECO:0000313|EMBL:ESQ06557.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 316.0
  • Bit_score: 82
  • Evalue 6.80e-13
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 313.0
  • Bit_score: 80
  • Evalue 9.00e-13

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Taxonomy

Streptomyces sp. PVA 94-07 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGAAAGACACCTCGAGCTGCGATCGCCGGGATGGGCGGCTTCCAGCGGCCATTTTGCCGCCATGTTCTCCTTTGGTATCGCTCCGATTGGCTTCCTCGTTCAAAAGAGCCTTACGGAGTCTATCTCCGTCCTGCACATTCTGAGCGTTCAGCTCGGCTGTAGCGCCATCGTGCTTTGGCTGATCAGCTTCATGTTGTGGAAAGAAGGAAGCATTGCACCCGGCGCCCTGGCCAAAGGCCTTGGCCTGGGCCTGCTGCAGCCCGGCGTGGTTCTCCTGTTGAACGTGGCGGGCGCGGCCCGGCTCGACAGTGTGACCTTGGTCCTGCTATGGGCCTTGCAGCCTCCCGCAACCGCCTTCGTCGGCGTGATCCTGCTGGGCGAGAGGCCGCCAAGCACCCTGAAATACGGCCTCGCCGTCAGTTTTGCCGGGCTCGTCCTCCTCGCAGTCCAGCGCAATCCGGTCGGTGCCAACCAGGCCGCCGGATTCGCCCTTGTTCTAGCCGCCATCGCGTGCGCTGCCGTCGGGCCTGCGATCAGCCGTCACCTGAACACGGTCGTGCTGCCGTGGCATCGGGCGGCATCCCTGCAGGTGACCGGCGGGGCCTTGCTCACCGGCCTTGGCCTGGTACTCGTCGGCGATGTCTCGGGCCTCCCCGCGCTCCCAGGCCTTTGGCCGTCGTTCGCTTTTCTGATCTTCGTGTCGTCGGCAGCGAGCTACCTCGCCTATAGCTTCGCGCTCTCGCGGATCGACGTGGCGTGGGTGTCGCTCTACGCAGCCGTGGGGCCCGGCCTTGGCGCGATCGTCGCGGTTGCCGTCTCGGGCCGCGCTCCGGGACCGGTGGAAGCTGCGGGCATTTCAGTGGTCGTCGCCGGCAGCGTGATCCCCCACCTCGGCAAGCGCGCGGATGCCCGGCAGGGTCGAGGCACGGCCATGGCCGGCAGCCTGCGTCGCGTCGGCATCGAGGCCGATCGCGGCAAATGCTGA
PROTEIN sequence
Length: 329
MERHLELRSPGWAASSGHFAAMFSFGIAPIGFLVQKSLTESISVLHILSVQLGCSAIVLWLISFMLWKEGSIAPGALAKGLGLGLLQPGVVLLLNVAGAARLDSVTLVLLWALQPPATAFVGVILLGERPPSTLKYGLAVSFAGLVLLAVQRNPVGANQAAGFALVLAAIACAAVGPAISRHLNTVVLPWHRAASLQVTGGALLTGLGLVLVGDVSGLPALPGLWPSFAFLIFVSSAASYLAYSFALSRIDVAWVSLYAAVGPGLGAIVAVAVSGRAPGPVEAAGISVVVAGSVIPHLGKRADARQGRGTAMAGSLRRVGIEADRGKC*