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berkeley_reactor_200306_biofilm_scaffold_35412_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(14414..15655)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine Putrescine ABC transporter permease component PotB n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HSH3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 406.0
  • Bit_score: 388
  • Evalue 6.80e-105
Spermidine Putrescine ABC transporter permease component PotB {ECO:0000313|EMBL:EKV31286.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 406.0
  • Bit_score: 388
  • Evalue 9.60e-105
ABC-type transporter, integral membrane subunit similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 409.0
  • Bit_score: 382
  • Evalue 8.10e-104

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Taxonomy

Caenispirillum salinarum → Caenispirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGACCGCCGTGCTCGTCGAACCGTCTCCCAGATCCCTGCGCCGGTCCCTGGTGGCCGGGTCCGGCAGCCGCAGGCGCGCCGCCGTCCTCCTGGTGCTGCCGCTCCTCGTGTTCCTGCTCGCGCTGTTCGTGCTGCCGATCGGCTATCTCCTGTGGAACGCCGTCGACGAGGCGCCGGTCGCCGGCGGCCTGTCGCGGACCGTCCAGGCCCTGCGCGGCTGGGACGGCCGCTCGCAGCCGGCCGACGCGGTGTTCGACGCGCTGGCGCTGGACCTGCGCGAGGCCGAGGCGGACGACAGCGTGCAGCGCATCGGCGCGCGCCTCAACTTCGAGGTGGCCGGCCTGCGCCGCATCCTGCGCCGCACGGCCGCAGCCGCGGCCGGGGAGGGGCCTGCGACGCCGCGCATCCTCGCGGCCGATCCCGTCTGGCGCTCGCCGCAGATCTGGGCGGCGATCCGCGACGTCGGCGCGGTCCCGACCATGGTCAACCTCCTCGCCGCGCTCGATCTCAAGCGCAGCCCCACCGGCGAGATCGCCGCCGTGGCGCCGGACTACCGCGTCAACGCCCCGCTGTTCCTGCGCACCCTGTGGATCGGCCTGCTGGTGACGTTGCTCTGCCTGGCCCTGGGCTACCCCGTCGCCTACCTCATCGCCAACGTGGCGCCGCGGACGGCCGGCATCCTGCTGCTGATGGTGGTCGTGCCGCTCTGGACCTCGCTGCTGGTGCGCACCGCCGCCTGGATGGCGCTGCTGCAGCGCAACGGCGTTATCAACGATGCGCTCGTCGGCCTCGGCCTGCTCGACGACGGCGACCGCCTGGCGCTGATCTTCAACGCCCGCGCCACGGTCATCGCCATGACCCATATCCTGCTGCCGTTCATGATCCTGCCGCTCTACAGTGTCATGCGCACCATTCCTCCGGTCTACATGCGCGCGGCCGAATCCCTTGGCGCCTCGCGCGCCTTGGCCTATCGCCGGGTCTATGTTCCGCAGGTCGCGCCCGGCATCGTCTCGGGATGCCTGCTCGTCTTCATCATGTCCCTGGGCTACTACATCACCCCGGCGCTGCTGGGCGGGGAAGGCGGCCAGATGATCTCCAACATGATCGCCTACCACGTCCGGGAATCGCTGAACTGGGGCCTCGCCTCGGCGCTGGGGGCGCTGCTGCTGGCCGGGGTGCTGGTGCTCTACTTCGTCTATGTCCGTGCCGTCGGCGCCGACCGGATCCGGGTGGGCGGCTGA
PROTEIN sequence
Length: 414
MTAVLVEPSPRSLRRSLVAGSGSRRRAAVLLVLPLLVFLLALFVLPIGYLLWNAVDEAPVAGGLSRTVQALRGWDGRSQPADAVFDALALDLREAEADDSVQRIGARLNFEVAGLRRILRRTAAAAAGEGPATPRILAADPVWRSPQIWAAIRDVGAVPTMVNLLAALDLKRSPTGEIAAVAPDYRVNAPLFLRTLWIGLLVTLLCLALGYPVAYLIANVAPRTAGILLLMVVVPLWTSLLVRTAAWMALLQRNGVINDALVGLGLLDDGDRLALIFNARATVIAMTHILLPFMILPLYSVMRTIPPVYMRAAESLGASRALAYRRVYVPQVAPGIVSGCLLVFIMSLGYYITPALLGGEGGQMISNMIAYHVRESLNWGLASALGALLLAGVLVLYFVYVRAVGADRIRVGG*