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berkeley_reactor_200306_biofilm_scaffold_35412_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 29298..30044

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C5087 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 227.0
  • Bit_score: 287
  • Evalue 9.90e-75
Transcriptional regulator {ECO:0000313|EMBL:EJJ31112.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 227.0
  • Bit_score: 282
  • Evalue 5.80e-73
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 227.0
  • Bit_score: 225
  • Evalue 1.00e-56

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGTCGAGAAACTCACCCCGGGCCGAGACCGCCTATCAGGCACTCCGGCAGGCGATCATCGAGCAGGCCCTGCTGCCCGGCGCCAAGCTGCCGGAGGACCAGATCGGCTCGCATTTCGGCATGAGCCGCACCCTGGTGCGGGCAACGCTGGCCCGCCTGCAGGCCGAGGGGCTGGTCGATGCGCGGCCCAAGCGCACCGCGACGGTGGCGCAGCCGAGCCTGGAGGAGGCCAAGGCGGTGTTCGAGGCACGTCGGGCGCTGGAGCGGGAGGCCGTGGCCCTGGTGGTCAGGCGCTGGCGGCCCGAATATGGCGCCGCGCTCGAAGGCCATGTGCGGGAGGAGGACGCCGCCAAGGCGCGAGGCGACGAACGCGTCTCGATCCGGCTCGCCGGCGAGTTCCACATCAAGCTCGCCGCCATGTCCGGCAACCCCGTCATCGAGCGCTATCTCGGCGAGCTGGTATCGCGCTGCTCGCTGATCCTGGCGCTGTACGGGCGGCCGCATTCCTCCGAATGCGCCGTCAACGAGCATTCCGCCATCATCGAGGCGCTGCGCCGGCGCGACGCGGCGGGTGCGGTCGCGCTGATGGACGAGCATGTCGGCTCGGTGGAACGGCGCGCCCTCCTCGCCGACGCGCCAGCGGCGGAGTCTGAGCTCGGCACCGTCCTGACGCGCTATGCCGAGGCGATCGAGGCGCGCGGCAGCGCCATCCCCCTGCCGGCCGGCAAGCGCAGGCAGACGCCATGA
PROTEIN sequence
Length: 249
MSRNSPRAETAYQALRQAIIEQALLPGAKLPEDQIGSHFGMSRTLVRATLARLQAEGLVDARPKRTATVAQPSLEEAKAVFEARRALEREAVALVVRRWRPEYGAALEGHVREEDAAKARGDERVSIRLAGEFHIKLAAMSGNPVIERYLGELVSRCSLILALYGRPHSSECAVNEHSAIIEALRRRDAAGAVALMDEHVGSVERRALLADAPAAESELGTVLTRYAEAIEARGSAIPLPAGKRRQTP*