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berkeley_reactor_200306_biofilm_scaffold_35412_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 30920..32023

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035D5495 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 365.0
  • Bit_score: 495
  • Evalue 3.50e-137
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV11134.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 367.0
  • Bit_score: 485
  • Evalue 6.70e-134
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 371.0
  • Bit_score: 454
  • Evalue 2.60e-125

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Taxonomy

Elstera litoralis → Elstera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAACGACATCACTCTCACACGCCGCGGCTTCCTCGGCGCCGCCGCCGGCTCCGCGCTGCTGCTCGGAGCGGGGCAGACGGCCCGCGCCGCCGACGGCATCACCATCGGCATGATCTATGTCGGCCCGCGCGACGATTTCGGCTGGAACCAGGCCCATGCCGTCGGCGCCAAGGCGCTGAAGGCCATCCCTGATGTCACGGTGCTGGAGGAGGAGAACGTCCCCGAAACCAACGCCGTCACCCAGACCATGGAGTCGATGATCAATGTCGACGGCGCCAAGCTCTTGTTCCCGACCTCGTTCGGCTATTTCGACCCGTTCATGATCGATGCGGCCAGGAAATATCCCGAGGTCGAGTTCCGCCACCCGACATCCCTCTGGGACAAGGCCAAGCATCCCATGAATCTCGGCGGCTATTTCTGCTACCTCGACCAGGGCCACTACGTGAACGGCATCGCCGCCGGCCTCTCCACCAAGTCCAACAAGATCGGCTTCGTCGCCGCCAAGCCGATCGCGCTGGTGCTCCGCAACATCAACGCCTTCACGCTCGGGGTGAAGAAGGTCAATCCGGCGGCGAGCGTCCATCTCGTCATCACCGGCGACTGGTCGATGCCGGTGCGCGAGGCCGAGGCGACCAATGCGCTGATCGACGCGGGCTGCGACGTCATCGCCTGCCATGTCGACAGCCCGAAGATCGTGGTGCAGACCGCCGAAGGGCGCGGCGTCAGGAGTTGCGGCCACAATGCCGACCAGTCGACGCTGGCGCCCAAGGGGTTCATCACCGGCGCCGAGCTGAAATGGGGCACGGTCTACACCGCCTATGCCGGCATGATCGCCAGGGGCGAAAAGCTGCCCAACGTCAACGAGGGCGGCTACGACAAGGACATGGTGTTCAGCACGCCGTTCGGGGCCAGCGCCACCGAGGCGGCCAAGGTGGCGGCCACCAAGGCCATGGCGGCCGTCAAGGCCGGCGCACCGATCTTCGTCGGGCCGCTGAAGGACAACACCGGCAAGCCGGTGATCGACAAGACGCTGGGCCTCTATGACCCGGCGCTGTGGGGCACGAACTACCTGATCGAGGGCGTGGTCGGGTCGATCGTCTGA
PROTEIN sequence
Length: 368
MNDITLTRRGFLGAAAGSALLLGAGQTARAADGITIGMIYVGPRDDFGWNQAHAVGAKALKAIPDVTVLEEENVPETNAVTQTMESMINVDGAKLLFPTSFGYFDPFMIDAARKYPEVEFRHPTSLWDKAKHPMNLGGYFCYLDQGHYVNGIAAGLSTKSNKIGFVAAKPIALVLRNINAFTLGVKKVNPAASVHLVITGDWSMPVREAEATNALIDAGCDVIACHVDSPKIVVQTAEGRGVRSCGHNADQSTLAPKGFITGAELKWGTVYTAYAGMIARGEKLPNVNEGGYDKDMVFSTPFGASATEAAKVAATKAMAAVKAGAPIFVGPLKDNTGKPVIDKTLGLYDPALWGTNYLIEGVVGSIV*