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berkeley_reactor_200306_biofilm_scaffold_44227_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1..141

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003645E68 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 46.0
  • Bit_score: 89
  • Evalue 7.30e-16
L-arabinose transport system permease protein araQ {ECO:0000313|EMBL:GAJ37493.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 46.0
  • Bit_score: 89
  • Evalue 7.90e-16
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 46.0
  • Bit_score: 69
  • Evalue 2.20e-10

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Taxonomy

Bradyrhizobium sp. DOA9 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GCCTTCAAGAACGAGGAGGCCGGCAACGACTACGGTCCCCTCATGGCCGCATCCACCCTCGTCGTCCTGCCGCTCGTCGTCGCCTTCCTCGCCGCGCAGCGATGGTTCGTCGAAGGCCTCACAGGCGGCGCCGTCAAATGA
PROTEIN sequence
Length: 47
AFKNEEAGNDYGPLMAASTLVVLPLVVAFLAAQRWFVEGLTGGAVK*