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berkeley_reactor_200306_biofilm_scaffold_44227_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(160..984)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6U7_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 240.0
  • Bit_score: 202
  • Evalue 4.60e-49
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 240.0
  • Bit_score: 202
  • Evalue 1.30e-49
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH88321.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 240.0
  • Bit_score: 202
  • Evalue 6.50e-49

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGGGTGGAGTATCGTCGACGAGGTGAGGGGTTGTCTGTTGGCCTCCTCCTTTCCCTCCAGCCACAGCAAGCGAGATGTGCCCATGGTCTATTTCGACCCGTGCGATGAGGCGGCACCGAGCGGACGGCGCCCTCGGTGGAAGGAGATCCAGCTCGAGATGGAAGGGTGGATCGAGGACGGGCGCTTCGAGCCCGGTGCCAGACTGCCGACGGAGGAGGAGCTGGCCCAAGAGTTTTCAGTCCACCGGCATACTGTCAGGCGGGCGTTGGCGGAGCTCCGGCTGAAGGATCTCGTCAGGGCCGAGCAGGGCCGTGGTATATTCGTGACGGAGGCGAATATATCGTACAGAATTGGCCGGCAGACGCGGTTGTCGCACACGGCGAGGATGCAGGGGCGCTCGCTTCAATACCGCCTGGTTTCTGTCGATCCCGTCAACGCCATTCGCTACGGCGCCCCACTCGGCTTGCCGAAAGGCCATCCGCTCATCCGGATCGTCATGATGCGCGTCCTCGACGGCCGGGAAATCGGAATCATGCGGAGCTACTATCCGCTGCCCCGGTTCGAAGGCATTCCGCAATGGATCGCATCGACGGGGTCGGTCGGCATGGCGATGGCCCATTACGGCGTCGATCAGATCAATCGCAAAAAGCTGCAGATCAAAGCGGTCGCCCCCAACGTGCATGAGACGAAGCTCATGAAGTTCGATAGATCAATGCCCATGCTGGAGCTCACGCATCTGGCTACCGATGCCCAGCACGTTCCGATCGAGTTTTCGATATCCAGGTATGACGGCCGATATTTCGACATCATCATGGATTTCTGA
PROTEIN sequence
Length: 275
MGWSIVDEVRGCLLASSFPSSHSKRDVPMVYFDPCDEAAPSGRRPRWKEIQLEMEGWIEDGRFEPGARLPTEEELAQEFSVHRHTVRRALAELRLKDLVRAEQGRGIFVTEANISYRIGRQTRLSHTARMQGRSLQYRLVSVDPVNAIRYGAPLGLPKGHPLIRIVMMRVLDGREIGIMRSYYPLPRFEGIPQWIASTGSVGMAMAHYGVDQINRKKLQIKAVAPNVHETKLMKFDRSMPMLELTHLATDAQHVPIEFSISRYDGRYFDIIMDF*