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berkeley_reactor_200306_biofilm_scaffold_44227_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13355..15259

Top 3 Functional Annotations

Value Algorithm Source
proline racemase protein (EC:5.1.1.4) similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 323.0
  • Bit_score: 266
  • Evalue 1.00e-68
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000362C1E3 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 625.0
  • Bit_score: 590
  • Evalue 1.80e-165
Proline racemase {ECO:0000313|EMBL:CDX42688.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 326.0
  • Bit_score: 291
  • Evalue 2.50e-75

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1905
GTGAACGCAGAGGACGGCGACCAGCGCAAGCCTTATTCGATCGGGCACGTGACGAGCGTCACGGGCGTCAACGCCTCGACGCTGCGCTCCTGGGAGCAGCAGGGGCTGATCGAGCCGGCCAAATCCTCCGGCGGGCGGCGCACCTATGACGAGGGCACGATCCAGCGCATCGTCGAGATCAGCCGGCTGCGCCGCGTCTACGGCTATGGCATCGCCGGGGTGAAGCGGGCGCTGGCCGAGAAGCAGGCCGAGGCGCCCGCCGCGCTGCCGGACGGGGAGGCGCCGGCCGAGCCGCTGACCGACCGCATCGGCGCCCGCGTCCGGGCGCTGCGGGTCGAGGCCGGCCTGTCGCTCCGGCAGGTGGCGGAGAAGACCGGCGTCGCCGCCTCCCATCTCAGCATGTTCGAGCGCGGCGTCGCCTTTCCCTCGCCCTCGCGTCTGGCCGCCATCGCCCGCCTGTTCAACCACAGCCTGGCCGACTTGCTCGGCGGCACCTCGACCCGCGGGCGGCCGATCATCCGCCGCGGCCAGGGTCGCATCGTCGGTTCCTTCGGGCCCGGCGTCTCGGTCGAGCAGCTCACCGTCGGCGAGCAGCTGATGGACTGCGAGATCTGGACCATCAGCCCCGGCGCGGAGAGCGACGGCTTCTACGCCCATGACGGCCAGGAGCTGATCCACGTGCTGGAGGGCGCCTTCGAGCTCGCCCTCGACGGCGAGGAGCCGCAGGTGCTCGGCGCCGGCGACAGCGCCTATTTCGACTCGACCCGCCAGCACCGCTGGCGCAACCCCGGCAAGGCGGCGGCGGTGGTGCTGTGGGTCAACACCGACATGCGCCGCCTCGCCTCGTTCGAGCAGAAGGGCACGGCCCGCTCGCTCGGACTCGGCCCGGCGGTGGGCGCGGGCATCGGCGAGCAGGCGCTCGCCCTCGCCCTGCCCGAGGGCTGCCAGACCTACCGGGTCGTCGACACCCACACGGCCGGCCATCCCACCCGCGTGCTGATCGAGCCGCTGGAGGGCCTGGACGGGGCGAGCGTGCGCGAGAAGCGCGACCGCTTCCGCGAGAAGCACGACCGGCTGCGCTCGCTGCTGCTGCACGAGCCGCGCGGCCATGCCGCCACCTTCGGCCTGGTGCCGGTCAAGTCGGACGAGGCCGATTTCGGCGCCATCTTCGTCTCCTCCTACAAGTATCTCGACATGTGCGGCCACGGCACCATCGGCTATGCCCGGGTGCTCGCCGCGCTCGGGCGCCTCGGCAGCCGCTCGTCCTTCAGCCTGGAAGTGCCGGCCGGCGTGGTGCAGGTCGAGCTCGGGCTGCACGGCGCGCCCGAGAACATCACGCTGCAGAACGTGCCGAGCTTCGTCGGCCTGGAGGCGATGGCGCTGCCGGAGATCGCGCCGGGCTGCCGCGCCTGCCTCGCCTATGGCGGCGGCTGGTACGCCAATGTCGACGTCGCCGGCCTCGGCCTCGCCATCGTCCCCGACGCCGTCTCGCAGCTGATGGCGATCGGCGCCCGCATCAAGGAGGCGGTCAACGCCCGCCTCCCGGCCCTCGGCCTCGGCTTCGCCGAGATCGACAGCACCCTGTTCCACGAGGAGCGGCCGGGCGCGCGGCCGCGCCAGCTCGTCATCCTCGAGCGCAACAAATACGACCGCTCGCCCTGTGGCACGGGCCTCTCCGCCCGCATGGCCGAGCTCGCCCTCGCCGGCCGGCTGCGGCCGGGCGCGGCCTACGAGATCGAGAACGTGCTCGGCGTGCCCTTCCTCGGCGAGGTGGCGGCCGAGACCAGCGTCGCCGGGCGGCCGGCGATCGTGCCGCGCGTCACCGGCCGGGCCAACCTGTCCGGCTTCTCCACCCTGATCGTGGAAGCCAACGACCCGCTTCCCGACGGCTTCCTGTGCCGATGA
PROTEIN sequence
Length: 635
VNAEDGDQRKPYSIGHVTSVTGVNASTLRSWEQQGLIEPAKSSGGRRTYDEGTIQRIVEISRLRRVYGYGIAGVKRALAEKQAEAPAALPDGEAPAEPLTDRIGARVRALRVEAGLSLRQVAEKTGVAASHLSMFERGVAFPSPSRLAAIARLFNHSLADLLGGTSTRGRPIIRRGQGRIVGSFGPGVSVEQLTVGEQLMDCEIWTISPGAESDGFYAHDGQELIHVLEGAFELALDGEEPQVLGAGDSAYFDSTRQHRWRNPGKAAAVVLWVNTDMRRLASFEQKGTARSLGLGPAVGAGIGEQALALALPEGCQTYRVVDTHTAGHPTRVLIEPLEGLDGASVREKRDRFREKHDRLRSLLLHEPRGHAATFGLVPVKSDEADFGAIFVSSYKYLDMCGHGTIGYARVLAALGRLGSRSSFSLEVPAGVVQVELGLHGAPENITLQNVPSFVGLEAMALPEIAPGCRACLAYGGGWYANVDVAGLGLAIVPDAVSQLMAIGARIKEAVNARLPALGLGFAEIDSTLFHEERPGARPRQLVILERNKYDRSPCGTGLSARMAELALAGRLRPGAAYEIENVLGVPFLGEVAAETSVAGRPAIVPRVTGRANLSGFSTLIVEANDPLPDGFLCR*