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berkeley_reactor_200306_biofilm_scaffold_54892_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4504..5196)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003711F2A similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 229.0
  • Bit_score: 291
  • Evalue 4.90e-76
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EKS71264.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 228.0
  • Bit_score: 287
  • Evalue 9.80e-75
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 225.0
  • Bit_score: 242
  • Evalue 7.30e-62

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Taxonomy

Burkholderia sp. SJ98 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
GTGGACATCAGCGAGCCGCTGGCCGGCTTCCTCAAGGAGCGCGGATTTGCCGCCACGGTGGCAGGAAGCGCCGAGACGGCGGACGGCATCCTGGCATGCGGGGATATCGACCTCGTGCTGCTCGACGTGATGCTGCCCGGCGAGAGCGGGCTCGACCTGTGCCGGCGGCTGCGCGCGTCGGATGCACCGGGGATCATCATGATGTCGGCTCTTTCGGAGCCGGCGGACAAGGCCATCGCGCTGGAGCTCGGTGCCGATGACTATGTCGGCAAGCCCTTCGATCTGCGCGAGCTTCTCGCCCGCATCCGGGCGGTCCTGCGCCGCGGCCTCGTCAGGGACGACGAGCCTCGCCCGATCGGCGCAGAGGCGGATGCGGCACTGCATTTCTCGGGATTCGCGTTCTATCCGCATCGTCGCTACCTGCGCTCGCCCGCGGGCGTACGCATCCCCCTGACGGGTGCCGAAGCCGATCTGCTGCTCGCCCTCTGCCAGAATGCGCGCAAGGTGCTCTCGCGGGAGGAACTGATCGGCTTCACGCGCGGCGAAGGCTTCGCAGTCGCCGCCCGCTCCGTCGATATCCTGATCAGCCGCCTGCGGCGCAAGCTGGCGGGCGCCGATCCGCTGGACAACGTCATCCGCACCGTGCGGGCGGGCGGATATATGTTCCAGGCCAGAGTGGCGCTCGAGCGATGA
PROTEIN sequence
Length: 231
VDISEPLAGFLKERGFAATVAGSAETADGILACGDIDLVLLDVMLPGESGLDLCRRLRASDAPGIIMMSALSEPADKAIALELGADDYVGKPFDLRELLARIRAVLRRGLVRDDEPRPIGAEADAALHFSGFAFYPHRRYLRSPAGVRIPLTGAEADLLLALCQNARKVLSREELIGFTRGEGFAVAARSVDILISRLRRKLAGADPLDNVIRTVRAGGYMFQARVALER*