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berkeley_reactor_200306_biofilm_scaffold_54892_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5776..7131

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QNG8_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 422.0
  • Bit_score: 520
  • Evalue 1.60e-144
Putative accessory protein to ABC-type macrolide transport protein MacB {ECO:0000313|EMBL:CCD90740.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 432.0
  • Bit_score: 510
  • Evalue 1.40e-141
accessory protein to ABC-type macrolide transport protein MacB similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 429.0
  • Bit_score: 502
  • Evalue 7.70e-140

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Taxonomy

Bradyrhizobium sp. ORS 375 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGCACAGCCCGGAACGGGCGGCGTCCGCCGTCCTGGCCCCGCACAGGAGCGTCCCGCCCGGTGGGCACGCGTTCGGCGAGGCGCCGATCCCGCCGGTCGCCGACACGTCCCGAAACAGGCCGCCAATATCCAAGGCGCGTCCGCGCCGCGGCCGGCGGGCGATCGCGATCGCCCTGTCCCTCGGCGCCGCCCTCGGGCTCGGCTGGCTCGGCAGGGCGCAGCTCCTGCCCGCGCCGGCCGCCGGCCTGATGACCGCACCCGCGGTGGTCGGCAGCATCGAGCAGAGCGTGCTGGCCAGCGGCACGCTGAAGCCGGTCAGGCTGGTCGCGGTCGGCGCCCAGGTCTCCGGCCGGATCACCGCGCTCAAGGTCGCCGTCGGCCAGAAGGTCCGGGCCGGCGACCTCATCGCCGAGATCGACGCCCTGACCAAGCAGAACGACCTGCGCTCGGCCCAGGCCGCCCTCGACAGCGCCCGCGCCCAGCGTGAGGAGAAGGAAGCGACGCTCGCCAAGAACGAGGCGGCCCTGGCGCGCCAGAAGCTGACCTATGGCCAGAACGCCTCCTCGCGCGCCGACTATGAATCCGCCGAGGCGGACGTGAAGGCGACGCGGGCGCAGATCGCCCAGCTCGACGCCTCGATCGTCGAGGCCGAGGTCTCGGTCTCCACCGCCCGGGTCAATCTCGACTACACCCGCATCACCGCCCCGATCGACGGCACCGTGCTCGCCATCGGCGCCCAGGAGGGGCAGACCGTCAACGCCACCCAGTCGACCCCGACCATCGTCGTGCTCGGCGATCTCGACACCATGACGATCCGGGCCGAGATCTCCGAGGCCGACGTGGTCCGGGTCGAGCCCGGCCAGGAGGTCTACTTCACCATCCTCGGCGAGCCGGACCGTCGCTTCCACGCCCGCCTGCGCTCGATCGAGCCGGCGCCGGAATCGGTCAAGACCGACAGCAGCTTCTCCACCGACAGCACCACGACCAGCTCGACGTCCTCCTCCTCGTCCACGTCCTCGGAGGCGATCTATTACAACGGCGTCTTCGACGTGCCGAACCCCGACGGCCGCCTCAGGACCTACATGACGGCCGAGGTGCACATCGTCCTCGGCGAGGCCCGGAACGTCCTCACCGTGCCGGCCGCCGCCCTCGCCGGGCCGGAGGCGGACGGCTCCTTCTCCGTGCGGGTCGTCGAGGCCGACGGCACGGTGGCGCGCCGCCCGGTCGAGGTCGGGCTCGACAACAAGATCGCCGCCGAGATCCGCGACGGCCTGAAGGCGGGCGAGCGCGTGGTGATCGGCGAGGCCGCCACTGCCTCCAGGACCATGATGGGTCCGCCGCCCGGCGGAATGTGA
PROTEIN sequence
Length: 452
MHSPERAASAVLAPHRSVPPGGHAFGEAPIPPVADTSRNRPPISKARPRRGRRAIAIALSLGAALGLGWLGRAQLLPAPAAGLMTAPAVVGSIEQSVLASGTLKPVRLVAVGAQVSGRITALKVAVGQKVRAGDLIAEIDALTKQNDLRSAQAALDSARAQREEKEATLAKNEAALARQKLTYGQNASSRADYESAEADVKATRAQIAQLDASIVEAEVSVSTARVNLDYTRITAPIDGTVLAIGAQEGQTVNATQSTPTIVVLGDLDTMTIRAEISEADVVRVEPGQEVYFTILGEPDRRFHARLRSIEPAPESVKTDSSFSTDSTTTSSTSSSSSTSSEAIYYNGVFDVPNPDGRLRTYMTAEVHIVLGEARNVLTVPAAALAGPEADGSFSVRVVEADGTVARRPVEVGLDNKIAAEIRDGLKAGERVVIGEAATASRTMMGPPPGGM*